CB290366

Overview
NameCB290366
Unique NameCB290366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            QGP+A+R+AK AI +G+EVD+ + L +EE CY +T+ T+DRLEGL AF EKR P+Y G
Sbjct:  256 QGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTISTKDRLEGLLAFKEKRPPRYKG 313          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            QGP+A+R+AK AI +G+EVD+ + L +EE CY +T+ T+DRLEGL AF EKR P+Y G
Sbjct:  281 QGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKG 338          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.307e-13
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            Q PIA+R+ K AI +G+EVD+AS + +E+ CY + + T+DRLEG+AAF EKR PK+ G
Sbjct:  238 QAPIAVRLGKVAIDRGMEVDIASGMAIEQMCYAQNIPTQDRLEGMAAFREKRAPKFVG 295          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            +GPIAIRMAK+AI +G+ VD AS + +E+  Y + + T+DR+EGL AF EKRKP Y G
Sbjct:  245 KGPIAIRMAKQAIDRGMNVDQASGMIIEQASYAQVIPTKDRIEGLTAFKEKRKPIYKG 302          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: ECHD2_HUMAN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens GN=ECHDC2 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            Q PIA+R+ K AI +G EVD+AS + +E  CY + + T DRLEG+AAF EKR PK+ G
Sbjct:  234 QAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTPKFVG 291          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: ECHD2_BOVIN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus GN=ECHDC2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = -3
Query:  270 QGPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 443
            Q PIA+R++K AI +G+EVD+AS + +E  CY + + T DRLEG+AAF EKR P++ G
Sbjct:  238 QAPIAVRLSKVAIDRGIEVDIASGMAIEGICYAQNIPTRDRLEGMAAFREKRLPRFVG 295          
BLAST of CB290366 vs. ExPASy Swiss-Prot
Match: YNGF_BACSU (Putative enoyl-CoA hydratase/isomerase yngF OS=Bacillus subtilis GN=yngF PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  270 GPIAIRMAKRAITKGLEVDMASALELEEECYIETLHTEDRLEGLAAFAEKRKPKYTG 440
            GPIA+R AK AI KGLE D+A+ L +E++ Y +T+ T+DR EGL AF EKR+  Y G
Sbjct:  203 GPIAVRQAKFAINKGLETDLATGLAIEQKAYEQTIPTKDRREGLQAFQEKRRAVYKG 259          
The following BLAST results are available for this feature:
BLAST of CB290366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AUHM_MOUSE8.418e-1458.62Methylglutaconyl-CoA hydratase, mitochondrial OS=M... [more]
AUHM_HUMAN1.099e-1358.62Methylglutaconyl-CoA hydratase, mitochondrial OS=H... [more]
ECHD2_MOUSE9.307e-1355.17Enoyl-CoA hydratase domain-containing protein 2, m... [more]
AUHM_DICDI6.033e-1256.90Methylglutaconyl-CoA hydratase, mitochondrial OS=D... [more]
ECHD2_HUMAN1.029e-1155.17Enoyl-CoA hydratase domain-containing protein 2, m... [more]
ECHD2_BOVIN1.344e-1153.45Enoyl-CoA hydratase domain-containing protein 2, m... [more]
YNGF_BACSU8.711e-1156.14Putative enoyl-CoA hydratase/isomerase yngF OS=Bac... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01ba07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290366 ID=CB290366; Name=CB290366; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTCCACAAAATATACAGCTTCAAGCTACCCCTGAA
AGCTGAACATTAAATATTATTGACATTGTTGATATTACATTTGAAGCCTG
TCCAACATCTGCAGAGGAACTGCTTATGGGCCCATTATTGTTAATATTAC
ATTTGAAGCCTGTCCAACATATGCAGTGCGAACTGCTCATGTGCCCATTG
TTGGGGCGCCCAAGAAAACCTGTCCAGATAGATAAAGGGCTATTGGCAGC
GTTCTCTTTCTCTCTATGTGCCGGTGTACTTGGGTTTCCGCTTCTCGGCA
AATGCAGCCAAGCCCTCCAACCGATCCTCTGTATGCAAGGTCTCAATGTA
GCACTCTTCTTCCAGTTCCAATGCCGATGCCATATCCACCTCCAATCCCT
TAGTAATAGCCCTTTTAGCCATCCTAATGGCTATCGGACCCTGAAGAACA
GAACCAGTTGTTACTTTGAACTCAAAAATTCAAGTTCATTATTTCTCCCG
TTCAATAGCTTCTAAGCCAGATCTACTTCATCACATCAAGTATAACTTGG
ACAGCGAGAAGTTACACCAACCAAAACGTACATATACATACACCAAGTAA
TTGCAACTCTACAGGCTGAAGGTCTTCTAAAAGCTTCCGTGCATCTAATA
TAGTCATAATCGTATCTCTGCTTAAATAAAGTTTTCGAACATGCATGATT
TACCACACAATGACATAATTTTAAAATCATGATGCCAAAAATTCAGGTAA
ATGTGCTCAAGTTCTGGCTGCCGAGAGATTTTTGACAGTATTGAAGTCAT
ATAACACACCACATGCTTTTCCCTACAAGAGAATTCTG
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