CB290408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.803e-74 Identity = 136/158 (86.08%), Postives = 144/158 (91.14%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QISE+LNVQVSDVKNVIIWGNHSS+QYPDVNHATVNT AGEKPVR+LV DDAWLNGEFI+TVQQRGAAIIKARK ACDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTAEEL+EEK Sbjct: 167 QISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVNTPAGEKPVRQLVSDDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.900e-71 Identity = 130/158 (82.28%), Postives = 141/158 (89.24%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 Q+SE+L+V VSDVKNVIIWGNHSS+QYPDVNHATV T+ GEKPVRELVK+D WLNGEFI+TVQQRGAAIIKARK ACDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTAEEL EEK Sbjct: 167 QVSERLSVPVSDVKNVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 3.788e-71 Identity = 131/158 (82.91%), Postives = 138/158 (87.34%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QISE+LNVQVSDVKNVIIWGNHSSSQYPDVNHATV T+ GEKPVRELV DD WLNGEFITTVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY VP+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA+EL+EEK Sbjct: 167 QISERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVKTSTGEKPVRELVSDDEWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 8.438e-71 Identity = 130/158 (82.28%), Postives = 142/158 (89.87%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QISE+L+V VSDVKNVIIWGNHSSSQYPDVNHA V T++GEKPVRELVKDDAWL+GEFI+TVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTAEEL EEK Sbjct: 167 QISERLSVPVSDVKNVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.102e-70 Identity = 130/158 (82.28%), Postives = 137/158 (86.71%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QISE+LNVQVSDVKNVIIWGNHSS+QYPDVNHATV T +KPVRELV DDAWLNGEFITTVQQRGAAIIKARK ACDHI DWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA EL EEK Sbjct: 167 QISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVKTQGVDKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 264.618 bits (675), Expect = 4.188e-70 Identity = 130/158 (82.28%), Postives = 137/158 (86.71%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QISEKLNVQV+DVKN IIWGNHSS+QYPDVNHATV T +GEKPVRELV DD WLN EFI+TVQQRGAAIIKARK ACDHIRDWVLGTPEGT+VSMGVYSDGSY VPAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA+ELSEEK Sbjct: 167 QISEKLNVQVTDVKNAIIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDEWLNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.630e-69 Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = -3 Query: 288 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 764 QISE+LN QVSDVKNVIIWGNHSSSQYPDVN TV T +GEK VRELV DDAWLNGEFITTVQQRGAAIIKARK ACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T EL EEKA Sbjct: 167 QISERLNAQVSDVKNVIIWGNHSSSQYPDVNPCTVKTGSGEKAVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKA 325
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 200.675 bits (509), Expect = 7.427e-51 Identity = 102/159 (64.15%), Postives = 119/159 (74.84%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V A E V E VKDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY VP L+YSFPVT ++ W IV+GL I++FSR+K+DLTA+EL+EEK Sbjct: 166 QIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 197.593 bits (501), Expect = 6.287e-50 Identity = 99/159 (62.26%), Postives = 117/159 (73.58%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QI+ KL V +DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+WL GEF+TTVQQRGAA+IKARK CDH+RD GTPEG +VSMGV SDG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 166 QIALKLGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CB290408 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 8.211e-50 Identity = 98/159 (61.64%), Postives = 118/159 (74.21%), Query Frame = -3 Query: 291 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 764 QI+ KL V DVKNVIIWGNHSS+QYPDVNHA V E V E +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG SY +P L+YSFPVT ++ W +V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 166 QIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEK 324 The following BLAST results are available for this feature:
BLAST of CB290408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290408 ID=CB290408; Name=CB290408; organism=Citrus sinensis; type=EST; length=766bpback to top |