CB290682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290682 vs. ExPASy Swiss-Prot
Match: CHIP_ARATH (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.185e-50 Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = -2 Query: 249 GYIVEDIWQELARAKYLLWEQEFSKRSWELQSXXXXXXXXXXXKHVLDIFIKEGFLDEASFTHLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFQDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKEAVGAYMDKHGWAYK 731 GY+VE+IW+EL++AKY+ WE + RSWEL S + LD+ E DEA H ++++AL +VF+KAAE+D P EVPDYLCC ITL+IF+DPVI+PSGVTYERA IL+HL KVGKFDPITRE + + LVPNLAIKEAV AY++KH WAYK Sbjct: 115 GYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAALNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEKHVWAYK 275
BLAST of CB290682 vs. ExPASy Swiss-Prot
Match: STUB1_MOUSE (STIP1 homology and U box-containing protein 1 OS=Mus musculus GN=Stub1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 258 HLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFQDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKEAVGAYMDKHGW 545 H K M + ++F + E ++PDYLC KI+ ++ ++P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE + A++ ++GW Sbjct: 205 HDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGW 300
BLAST of CB290682 vs. ExPASy Swiss-Prot
Match: STUB1_HUMAN (STIP1 homology and U box-containing protein 1 OS=Homo sapiens GN=STUB1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 258 HLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFQDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKEAVGAYMDKHGW 545 H K M + ++F + E ++PDYLC KI+ ++ ++P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE + A++ ++GW Sbjct: 204 HDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGW 299
BLAST of CB290682 vs. ExPASy Swiss-Prot
Match: STUB1_CHICK (STIP1 homology and U box-containing protein 1 OS=Gallus gallus GN=STUB1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 258 HLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFQDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKEAVGAYMDKHGW 545 H K + + ++F + E ++PDYLC KI+ ++ ++P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE + A++ ++GW Sbjct: 215 HDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISENGW 310 The following BLAST results are available for this feature:
BLAST of CB290682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290682 ID=CB290682; Name=CB290682; organism=Citrus sinensis; type=EST; length=738bpback to top |