CB290716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290716 vs. ExPASy Swiss-Prot
Match: TGD1_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana GN=TGD1 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.869e-64 Identity = 119/156 (76.28%), Postives = 137/156 (87.82%), Query Frame = 1 Query: 370 PARHTRLFAIPNTDDGHPSVSMMEENKIT-NHAPGSEAESFLSKWSPPQYLWRGLSVPVLAGQVIIRIIKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGT 834 P R RL+ N +DGHPS+SM+EE T N+AP EAE SKWSP +Y+WRGLSVP++AGQV++RI+KGKIHWRNTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFTRLGLNRS+GGVLALAFSRELSPV+T+IVVAGR+GSAFAAELGT Sbjct: 49 PIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWRGLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGT 204
BLAST of CB290716 vs. ExPASy Swiss-Prot
Match: Y1045_SYNY3 (UPF0393 membrane protein Slr1045 OS=Synechocystis sp. (strain PCC 6803) GN=slr1045 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.479e-26 Identity = 55/97 (56.70%), Postives = 77/97 (79.38%), Query Frame = 1 Query: 544 LAGQVIIRIIKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGT 834 L GQV + I++G+I+ RNTL+Q+ VGP S+ + L+T+ FVGM FTIQ REF G ++GGVL+L+ +REL+PV+TA+V+AGR+GSAFAAE+GT Sbjct: 23 LTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQVAREFIYYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGT 119
BLAST of CB290716 vs. ExPASy Swiss-Prot
Match: YCF63_PORYE (UPF0393 membrane protein ycf63 OS=Porphyra yezoensis GN=ycf63 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.313e-18 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 490 LSKWSPPQYLWRGLSVPVLAGQVIIRIIKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGT 834 L KW + R S L +++IR+ K++ N ++Q+ VGP S+ + LLT+ F+ M FT+Q +EF L ++G V+ +AF+RELSPV+TA+++AG+IGS+F AE+ T Sbjct: 6 LQKW-----IQRFSSTIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLDAASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIAT 115
BLAST of CB290716 vs. ExPASy Swiss-Prot
Match: YCF63_PORPU (UPF0393 membrane protein ycf63 OS=Porphyra purpurea GN=ycf63 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17 Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 490 LSKWSPPQYLWRGLSVPVLAGQVIIRIIKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGT 834 L KW L V +LA R+ KI+ + +Q+ VGP S+ + LLT+ F+ M FT+Q +EF L ++G V+ +AF+RELSPV+TA+++AG+IGS+F AE+ T Sbjct: 6 LKKWIQKLNSTLSLFVSLLA-----RLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISMVFTMQIAKEFLHLDAASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIAT 115 The following BLAST results are available for this feature:
BLAST of CB290716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290716 ID=CB290716; Name=CB290716; organism=Citrus sinensis; type=EST; length=835bpback to top |