CB291077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.850e-45 Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = -2 Query: 576 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 896 RY LKN TGEIVIKHL ++QE NQ+NF D+ T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE S DGE+Y+DS+ Sbjct: 330 RYELKNNTTGEIVIKHLGKDQENNQSNFHDAETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDMRTFDELS-DGEVYEDSD 435
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.792e-42 Identity = 80/107 (74.77%), Postives = 95/107 (88.79%), Query Frame = -2 Query: 576 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 896 RY LKN+ TGE+V+KH ++QE++ +NF DS T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE SD E+Y+DS+ Sbjct: 329 RYELKNSTTGEMVVKHFGKDQESDTSNFHDSETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDMRTFDELSDT-EVYEDSD 434
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38 Identity = 77/105 (73.33%), Postives = 87/105 (82.86%), Query Frame = -2 Query: 582 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 896 RYV+KN+ TGE VIKHLN+EQE N NF+ + + L+V+EK SLLEW ANEYRRFGC LEFVTNKSQEGSQFCRGFGGIGGILRYQLDM +FD S+DGE DD Sbjct: 331 RYVMKNSATGETVIKHLNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDMTAFD--SEDGEALDD 433
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.382e-27 Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = -2 Query: 582 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 896 RYVLKN T E I L +QE ++ +F D T E+E+ E SLLEWFAN Y++FG TLE VT++SQEGSQF +GFGGIGG+LRY++D + + DD ++YDD Sbjct: 330 RYVLKNHTTDEEKILFLKPDQEKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQGMEFNDDDPDLYDD 434
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.539e-24 Identity = 53/108 (49.07%), Postives = 77/108 (71.30%), Query Frame = -2 Query: 576 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSD-DGEIYDDSE 896 RY+L+ TGE + LN++Q + + F+D + + E+ E+ ++EWFAN Y+ FG +LEFVTNKSQEGSQFC+GFGG+GG+LRYQ+D ++F + D YDDS+ Sbjct: 332 RYLLR-LPTGEEKVIFLNKDQNKDASVFKDKESGLDYEIVEEMPIVEWFANNYKNFGASLEFVTNKSQEGSQFCKGFGGLGGLLRYQVDFAQLNDFDNPDENEYDDSD 438
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24 Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 582 RYVLKNTVTG-EIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRS--FDEFSDDGEIYDD 896 RYVLKN + HL EQE ++++F D + E+E+ E LLEW AN Y+ FG TLE +T+KSQEGSQF RGFGGIGGILRY++D +S DE +DG DD Sbjct: 330 RYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDELDNDGFDLDD 437
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.223e-23 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = -2 Query: 585 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 896 RYVL T E I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 330 RYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.223e-23 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = -2 Query: 585 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 896 RYVL T E I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 330 RYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_PONAB (Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii GN=ETF1 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.223e-23 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = -2 Query: 585 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 896 RYVL T E I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 330 RYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291077 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4) HSP 1 Score: 109.768 bits (273), Expect = 2.223e-23 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = -2 Query: 585 RYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 896 RYVL T E I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 330 RYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433 The following BLAST results are available for this feature:
BLAST of CB291077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291077 ID=CB291077; Name=CB291077; organism=Citrus sinensis; type=EST; length=897bpback to top |