CB292891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RT11_MARPO (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha GN=RPS11 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14 Identity = 49/126 (38.89%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 198 NVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 575 N++ +I+ NT +T+TD GN K +SSG + KG + + YAA+ATAE+ R+A +G K V VR+KG Y K ++ + G I I D T PHNGCR PKKRR+ Sbjct: 9 NMQKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSVG-FKGSRRSTNYAAQATAENAARVAIQLGFKFVEVRIKGLGY--GKESSLRGLKLGGL------IITKIRDVTPTPHNGCRPPKKRRV 125
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CHRVO (30S ribosomal protein S11 OS=Chromobacterium violaceum GN=rpsK PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.969e-14 Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 198 SSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFRE-GFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 563 S VH+ NNT +T+TD +GN A+SG KG K + +AA+ AEH G++A+ G+K++ VR+KG + A+ + GF I I D T PHNGCR PKKRRI Sbjct: 19 SEGIVHVHASFNNTIITITDRQGNALSWATSGGAG-FKGSRKSTPFAAQVAAEHAGKVAQEYGVKNLEVRIKG--PGPGRESAVRALNSLGF-------KITSISDVTPVPHNGCRPPKKRRI 131
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RT11_PROWI (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii GN=RPS11 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.102e-14 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = -2 Query: 198 QFPRYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 590 Q R +E S VHI+ NNT +T+TD +GN + S+G L K K + YA+ A AE + A N G ++++V++KG Y KK AI + + I I++ T HNGCR PKKRR+ Sbjct: 7 QISRKFIEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTL-GFKNSRKSTVYASGAAAEALASKAFNEGYRTIIVKIKGLGYGKK--SAIRGLQ------KSNLVIKQIQEVTPIAHNGCRPPKKRRV 128
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CLOPS (30S ribosomal protein S11 OS=Clostridium perfringens (strain SM101 / Type A) GN=rpsK PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = -2 Query: 198 RYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 581 R NVEH + HI+ NN+ VT+TD+KGN AS+G L KG K + +AA+ AE + A GLKSV V VKG + AI S + + I+D T PHNGCR PK+RR+ Sbjct: 15 RKNVEHGA--AHIQSTFNNSIVTLTDAKGNALAWASAGGLG-FKGSRKSTPFAAQMAAETAAKAAMEHGLKSVEVYVKGPG--AGREAAIRSLQAAGLE------VTLIKDVTPIPHNGCRPPKRRRV 131
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CLOPE (30S ribosomal protein S11 OS=Clostridium perfringens GN=rpsK PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = -2 Query: 198 RYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 581 R NVEH + HI+ NN+ VT+TD+KGN AS+G L KG K + +AA+ AE + A GLKSV V VKG + AI S + + I+D T PHNGCR PK+RR+ Sbjct: 15 RKNVEHGA--AHIQSTFNNSIVTLTDAKGNALAWASAGGLG-FKGSRKSTPFAAQMAAETAAKAAMEHGLKSVEVYVKGPG--AGREAAIRSLQAAGLE------VTLIKDVTPIPHNGCRPPKRRRV 131
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CLOP1 (30S ribosomal protein S11 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsK PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = -2 Query: 198 RYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 581 R NVEH + HI+ NN+ VT+TD+KGN AS+G L KG K + +AA+ AE + A GLKSV V VKG + AI S + + I+D T PHNGCR PK+RR+ Sbjct: 15 RKNVEHGA--AHIQSTFNNSIVTLTDAKGNALAWASAGGLG-FKGSRKSTPFAAQMAAETAAKAAMEHGLKSVEVYVKGPG--AGREAAIRSLQAAGLE------VTLIKDVTPIPHNGCRPPKRRRV 131
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CLOBL (30S ribosomal protein S11 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rpsK PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 52/128 (40.62%), Postives = 68/128 (53.12%), Query Frame = -2 Query: 198 RYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 581 R NVEH HIK NN+ VT+TDS GN AS+G L +G K + +AA+ AE ++A GLKS+ V VKG + AI S + + I+D T PHNGCR PK+RR+ Sbjct: 16 RKNVEHGC--AHIKSTFNNSIVTITDSVGNTLSWASAGGLG-FRGSRKSTPFAAQMAAETAAKVAMEHGLKSIEVYVKGPG--SGREAAIRSLQAAGLE------VTLIKDVTPIPHNGCRPPKRRRV 132
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_CLOBJ (30S ribosomal protein S11 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rpsK PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 52/128 (40.62%), Postives = 68/128 (53.12%), Query Frame = -2 Query: 198 RYNVEHSSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 581 R NVEH HIK NN+ VT+TDS GN AS+G L +G K + +AA+ AE ++A GLKS+ V VKG + AI S + + I+D T PHNGCR PK+RR+ Sbjct: 16 RKNVEHGC--AHIKSTFNNSIVTITDSVGNTLSWASAGGLG-FRGSRKSTPFAAQMAAETAAKVAMEHGLKSIEVYVKGPG--SGREAAIRSLQAAGLE------VTLIKDVTPIPHNGCRPPKRRRV 132
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_HYPNA (30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rpsK PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.517e-13 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 198 SSEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFREGFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 563 +S VH+ NNT VT+TD++GN +SSG + KG K + YAA+ AE + A+ GL++V VRV+G + A+ + + + I DTT PHNGCR PK+RR+ Sbjct: 17 TSGIVHVNSSFNNTMVTITDAQGNTISWSSSGVM-NFKGSRKSTPYAAQMAAEDAAKKAKEHGLQTVEVRVRGPG--SGRESALRALQAAGLT------VTAINDTTPIPHNGCRPPKRRRV 129
BLAST of CB292891 vs. ExPASy Swiss-Prot
Match: RS11_RALME (30S ribosomal protein S11 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsK PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13 Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = -2 Query: 198 GPSQFGQFPRYNVEHS--SEFVHIKLMRNNTFVTVTDSKGNKKIGASSGCLPELKGGPKMSRYAAEATAEHVGRLARNMGLKSVVVRVKGFTYFKKKRQAIMSFRE-GFANSRDQNPIVYIEDTTRRPHNGCRLPKKRRI 608 GP+ Q R V+ + H+ NNT +T+TD +GN A++G KG K + +AA+ AE+ GR+A++ G+K++ VR+KG + A+ + G I IED T PHNGCR PK+RRI Sbjct: 4 GPNNAAQRARKKVKKNVADGIAHVHASFNNTIITITDRQGNALSWATAGG-QGFKGSRKSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--PGPGRESAVRALNALGI-------KIAVIEDVTPVPHNGCRPPKRRRI 133 The following BLAST results are available for this feature:
BLAST of CB292891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CB292891 ID=CB292891; Name=CB292891; organism=Citrus sinensis; type=EST; length=882bpback to top |