CB293164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F-type 2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.419e-51 Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 1 Query: 232 GVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRSG 603 G VR SLE TVG+VTEV+KDTFWPIVKAAGDK VVLDMYTQWCGPCKVIAPK++EL++KY D++FLKLDCNQ+NK LAKELGIRVVPTFKILKDNK VKEVTGAK E L+ AI+A RSG Sbjct: 62 GSCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIEAARSG 185
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.457e-50 Identity = 98/122 (80.33%), Postives = 110/122 (90.16%), Query Frame = 1 Query: 241 TVRSSLEIAG--ATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRS 600 +VRSSLE AG TVG+VTEVNKDTFWPIV AAGDKTVVLDM+T+WCGPCKVIAP ++EL++KY DV+FLKLDCNQ+NKSLAKELGI+VVPTFKILKDNK VKEVTGAK + LV AID VRS Sbjct: 60 SVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVRS 181
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F-type 1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 3.311e-47 Identity = 91/124 (73.39%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 229 GGVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRS 600 G VR SLE +VG+VTEV+KDTFWPIVKAAG+K VVLDMYTQWCGPCKVIAPK++ L++KY DV+FLKLDCN +N+ LAKELGIRVVPTFKILKDNK VKEVTGAK + LV AI+ RS Sbjct: 51 GDSSVVRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARS 174
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.632e-47 Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 229 GGVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRS 600 G VR SL+ +VG+VTEV+KDTFWPIVKAAG+K VVLDMYTQWCGPCKVIAPK++ L++KY DV+FLKLDCN EN+ LAKELGIRVVPTFKILKDN+ VKEVTGAK + LV AI+ RS Sbjct: 54 GDSSVVRCSLQTVNVSVGQVTEVDKDTFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARS 177
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF_SPIOL (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 8.154e-46 Identity = 94/138 (68.12%), Postives = 112/138 (81.16%), Query Frame = 1 Query: 205 KKSNKQLNGGVFTVRSSLEIAGAT------VGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRS 600 +K +++ GG VR+S+E A T VG+VTEVNKDTFWPIVKAAGDK VVLDM+TQWCGPCK +APK+++LA++Y DVIFLKLDCNQENK+LAKELGIRVVPTFKILK+N V EVTGAK + L+ AI A RS Sbjct: 54 RKDRRRMRGG--EVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 189
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44 Identity = 93/132 (70.45%), Postives = 106/132 (80.30%), Query Frame = 1 Query: 220 QLNGGVFTVRSSLEIA-GAT----VGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDAVRS 600 +++G V++SLE A GA VG+VTEV+KDTFWPI AGDK VVLDMYTQWCGPCKV+APK+QELA+K DV+FLKLDCNQENK LAKELGIRVVPTFKILK K V EVTGAK + LV AI+A RS Sbjct: 59 RMSGRSCCVKASLETAVGAESETLVGKVTEVDKDTFWPIANGAGDKPVVLDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAIEAARS 190
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15 Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 298 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAID 588 +KD F + AAGDK VV+D WCGPCK+I P F L++KYS+V+FL++D + + + +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKDAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVD-DCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: THIO_HUMAN (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 298 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAID 588 +K F + AAGDK VV+D WCGPCK+I P F L++KYS+VIFL++D + + + +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVD-DCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 298 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAID 588 +K F ++ +AGDK VV+D WCGPCK+I P F L++K+++V+F+++D + + K +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKSAFQEVLDSAGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVD-DCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293164 vs. ExPASy Swiss-Prot
Match: TRX1_SCHPO (Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 337 DKTVVLDMYTQWCGPCKVIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKGVKEVTGAKLEHLVFAIDA 591 DK VV+D + WCGPCK IAPKF++ + YSD F+K+D +Q ++ +A E G+ +P+F + K+ + ++E+ GA L +I A Sbjct: 18 DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSE-IAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKA 101 The following BLAST results are available for this feature:
BLAST of CB293164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293164 ID=CB293164; Name=CB293164; organism=Citrus sinensis; type=EST; length=702bpback to top |