CB293705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.386e-31 Identity = 51/87 (58.62%), Postives = 53/87 (60.92%), Query Frame = -3 Query: 145 MASVPGTSPCMTSLSCSLKQTQGRXXXXXXXXXXXNGKSFPSLRMRSAPRFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 405 MASV GTS M S SL + R GKSF LRMRSA RF V CAAKPE V+KVC IVKKQLALP D V GESKF Sbjct: 1 MASVTGTSISMASFKASLAPS--RVSNLRSVSLPIKGKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKF 84 HSP 2 Score: 76.2554 bits (186), Expect = 2.386e-31 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 A LGADSLDT EIVMGLEE+FGI+VEEESAQSI+T QDAAD +EKLI Sbjct: 85 ATLGADSLDTVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLI 131
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.971e-28 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 +ALGADSLDT EIVMGLEE+FGISVEEESAQSI T QDAAD +EKL+ Sbjct: 88 SALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLM 134 HSP 2 Score: 70.4774 bits (171), Expect = 2.971e-28 Identity = 43/86 (50.00%), Postives = 48/86 (55.81%), Query Frame = -3 Query: 145 ASVPGTSPCMTSLSCSLKQTQGRXXXXXXXXXXXNGKSFPSLRMRSAPRFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 402 ++ G S C+ S SCS GR + KSFPSLR RVSC AKPE V KVC+IVKKQLALP D V G SKF Sbjct: 3 SAAAGASICIKSASCS-PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKF 87
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.036e-27 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 +ALGADSLDT EIVMGLEE+FGISVEEESAQSI T QDAAD +EKL+ Sbjct: 93 SALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLV 139 HSP 2 Score: 65.0846 bits (157), Expect = 7.036e-27 Identity = 40/81 (49.38%), Postives = 45/81 (55.56%), Query Frame = -3 Query: 145 CMTSLSCSLKQTQ--GRXXXXXXXXXXXNGKSFPSLRMRSAP-RFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 378 C+ S SCSL + Q +GK FPSLR P FRV C AK E V +VC+IVKKQLALP D V G SKF Sbjct: 12 CIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKF 92
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.811e-26 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 +ALGADSLDT EIVMGLEE+FGISVEEESAQSI T QDAAD +EKL+ Sbjct: 89 SALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLM 135 HSP 2 Score: 62.7734 bits (151), Expect = 5.811e-26 Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = -3 Query: 145 ASVPGTSPCMTSLSCSLKQTQGRXXXXXXXXXXXNGKSFPSLRM-RSAPRFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 402 ++ G S C+ S S S GR + KSFPSL+ +S+ RVSC AKPE V KVC IVKKQLALP D V G SKF Sbjct: 3 SAAAGASICIKSASFS-PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKF 88
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.284e-25 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 +ALGADSLDT EIVMGLEE+FGISVEEESAQSI T QDAAD +EKL+ Sbjct: 86 SALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLM 132 HSP 2 Score: 61.6178 bits (148), Expect = 1.284e-25 Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = -3 Query: 145 ASVPGTSPCMTSLSCSLKQTQGRXXXXXXXXXXXNGKSFPSLRMRSAPRFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 402 ++ P +S C+ S SCS GR + KSF S R + RV+C AKPE V KVC IVKKQLALP D V G SKF Sbjct: 3 SAAPASSICIKSASCSAL-APGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKF 85
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 3.281e-19 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = -1 Query: 3 SQNSAALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 155 S A LGADSLDT EIVMGLEE FGISVEE SAQ+I+T +DAA+ ++ L+ Sbjct: 77 SSTFADLGADSLDTVEIVMGLEEAFGISVEESSAQTIATVEDAANLIDSLV 127 HSP 2 Score: 49.6766 bits (117), Expect = 3.281e-19 Identity = 27/47 (57.45%), Postives = 30/47 (63.83%), Query Frame = -3 Query: 145 SLRMRSAP-RFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 282 S R++ P RF V CAAK E V+KVC IVK QLAL D V G S F Sbjct: 34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTF 80
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 9.245e-19 Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = -1 Query: 3 PFPESQNSAALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 167 P + LGADSLDT EIVMGLEE+F I+V+E SAQ I+T QDAA+ +EKL+ Sbjct: 90 PVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIATVQDAANLIEKLV 144 HSP 2 Score: 48.9062 bits (115), Expect = 9.245e-19 Identity = 30/56 (53.57%), Postives = 35/56 (62.50%), Query Frame = -3 Query: 145 SFPSLRMR-SAPRFRVSCAA------KPEPVDKVCQIVKKQLALPADPTVPGESKF 291 SF S+ R S+ RF++ CAA K E VDKVC IVKKQLA+P V ESKF Sbjct: 42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKF 97
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP3_HORVU (Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 2.059e-18 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = -1 Query: 3 LGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 137 LGADSLDT EIVMGLEE+F ISVEE SAQ+I+T +DAA ++KL+ Sbjct: 83 LGADSLDTVEIVMGLEEEFQISVEETSAQAIATVEDAATLIDKLV 127 HSP 2 Score: 49.6766 bits (117), Expect = 2.059e-18 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = -3 Query: 145 LRMRSAP-RFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 279 LR++ P RF V C+AK + V+KVC+IVKKQLA+P V G +KF Sbjct: 35 LRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKF 80
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP2_ARATH (Acyl carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 7.619e-18 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 AALGADSLDT EIVMGLEE+FGI + EE AQSI+T + AA +E+L+ Sbjct: 85 AALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELL 131 HSP 2 Score: 48.1358 bits (113), Expect = 7.619e-18 Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = -3 Query: 145 KSFPSLRMRSAP-RFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 294 +S S +R P R VSCAAKPE VDKVC +V+KQL+L + +KF Sbjct: 34 RSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKF 84
BLAST of CB293705 vs. ExPASy Swiss-Prot
Match: ACP_BRACM (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.292e-17 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 3 AALGADSLDTAEIVMGLEEQFGISVEEESAQSISTFQDAADPMEKLI 143 A LGADSLDT EIVMGLEE+F I + EE AQ I+T ++AA+ +E+L+ Sbjct: 84 ADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELV 130 HSP 2 Score: 51.2174 bits (121), Expect = 1.292e-17 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = -3 Query: 145 SLRMRSAPRFRVSCAAKPEPVDKVCQIVKKQLALPADPTVPGESKF 282 +LR RF +SCAAKPE V+KV +IVKKQL+L D V E+KF Sbjct: 38 NLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKF 83 The following BLAST results are available for this feature:
BLAST of CB293705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293705 ID=CB293705; Name=CB293705; organism=Citrus sinensis; type=EST; length=515bpback to top |