CB293706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34 Identity = 88/138 (63.77%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 105 MASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 518 MASVTGTS M S S + R GKSF LRMRSA RF V CAAKPETV+KVC IVKKQLALP D+ TGESKFA LGADSLDTVEIVMGL SAQ+I+TVQDAADLIEKLIE KS Sbjct: 1 MASVTGTSISMASFKASLAPS--RVSNLRSVSLPIKGKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKKS 135
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29 Identity = 77/136 (56.62%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 108 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 ++ G S C+ S SCS GR KSFPSLR RVSC AKPETV KVC+IVKKQLALP D+ G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKSASCS-PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 76/137 (55.47%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 108 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRM-RSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 ++ G S C+ S S S GR KSFPSL+ +S+ RVSC AKPETV KVC IVKKQLALP D+ G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKSASFS-PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 73/139 (52.52%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 108 ASVTGTSACMTSLSCSFKQTQ--GRXXXXXXXXXXXXGKSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 A+ + C+ S SCS + Q GK FPSLR P FRV C AK ETV +VC+IVKKQLALP D+ G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+ K Sbjct: 4 AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLVGNK 142
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 73/136 (53.68%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 108 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 ++ +S C+ S SCS GR KSF S R + RV+C AKPETV KVC IVKKQLALP D+ +G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAPASSICIKSASCS-ALAPGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 64/108 (59.26%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 219 SFPSLRMR-SAPRFRVSCAA------KPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 521 SF S+ R S+ RF++ CAA K ETVDKVC IVKKQLA+P T T ESKF+ LGADSLDTVEIVMGL SAQ I+TVQDAA+LIEKL+ K+A Sbjct: 42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIATVQDAANLIEKLVTEKTA 149
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP3_HORVU (Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 231 LRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 521 LR++ P RF V C+AK +TV+KVC+IVKKQLA+P T G +KF+ LGADSLDTVEIVMGL SAQ I+TV+DAA LI+KL+ KS+ Sbjct: 35 LRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKFSDLGADSLDTVEIVMGLEEEFQISVEETSAQAIATVEDAATLIDKLVSAKSS 132
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 228 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLI 506 S R++ P RF V CAAK ETV+KVC IVK QLAL DT +G S FA LGADSLDTVEIVMGL SAQTI+TV+DAA+LI+ L+ Sbjct: 34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTFADLGADSLDTVEIVMGLEEAFGISVEESSAQTIATVEDAANLIDSLV 127
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP_BRACM (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 228 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 +LR RF +SCAAKPETV+KV +IVKKQL+L D E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQLK 133
BLAST of CB293706 vs. ExPASy Swiss-Prot
Match: ACP2_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20 Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 228 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTGTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 515 +LR R VSCAAKPETV+KV +IVKKQL+L D E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQAK 133 The following BLAST results are available for this feature:
BLAST of CB293706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293706 ID=CB293706; Name=CB293706; organism=Citrus sinensis; type=EST; length=709bpback to top |