CB294019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB294019 vs. ExPASy Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 309 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKI-KIAIRRRPNAGCVNGANETGTKRSPVR---SVEDRKEEYDRARARIFSGPS 767 FLV L+N PR R+ +L++E +I F+ N + +F TSY R+ HRV+ ++GL ++ ++ G ++V KT+ ++ P + +E + DK E K I +R N+ N+ + R S+E+R+EEY RAR RIFS S Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNE-----HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDS 302
BLAST of CB294019 vs. ExPASy Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 309 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEDRKEEYDRARARIFS 758 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+E+R+EEY R R RIF+ Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIFA 300
BLAST of CB294019 vs. ExPASy Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 309 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEDRKEEYDRARARIFS 758 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+E+R+EEY R R RIF+ Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFA 300
BLAST of CB294019 vs. ExPASy Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 47/158 (29.75%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 309 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDK---LEKIKIAIRRRPNAGCVNGANETGTKRSPVRSVEDRKEEYDRARARIFSGPS 767 FL+ L+N R R+ +L+ME ++ F+ + + + +F +SY R+ HRV+ ++GL ++ ++ G +++ KT+ ++ P R E + ++SEES K L++ +I + N ++ + +RS +S+E+R+EEY R R RIF+ S Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQNRMHPFRDD--RRS--KSIEEREEEYQRVRERIFAHDS 298 The following BLAST results are available for this feature:
BLAST of CB294019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB294019 ID=CB294019; Name=CB294019; organism=Citrus sinensis; type=EST; length=767bpback to top |