CB304427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.702e-25 Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = -3 Query: 268 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 447 NCQKSKIFFIAWSP +SRIRAKMLYATSK+RFRRELDG+HYEIQATDPTEMDLE LR RA Sbjct: 83 NCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERA 142
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.440e-24 Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = -3 Query: 268 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 447 NCQKSKIFF+AWSPS SRIRAKMLYATSK+RFRRELDG+HYEIQATDP+E+D+E LR RA Sbjct: 85 NCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERA 144
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.634e-23 Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = -3 Query: 268 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 447 N QKSKIFFIAWSPSTSRIRAKMLY+TSKDR ++ELDG HYEIQATDPTE+DLE LR RA Sbjct: 85 NVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERA 144
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.123e-22 Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NCQKSKIFF AWSPSTS IRAK+LY+TSKD+ REL GIHYEIQATDPTE+DLE LR RA+ Sbjct: 86 NCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.321e-21 Identity = 45/61 (73.77%), Postives = 55/61 (90.16%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NCQKSKIFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI E+QATDPTE+ L+ +R RA+ Sbjct: 79 NCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.262e-20 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NC+KSKIFFI+WSPS SRIRAK +YA S+++FR ELDG+H+EIQATDP +MDLE LR RA+ Sbjct: 89 NCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.262e-20 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RELDGI E+QATDP+EM L+ ++ R + Sbjct: 79 NCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.152e-20 Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ R+RA+ Sbjct: 79 NCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.671e-20 Identity = 42/61 (68.85%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 265 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAS 447 NCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ L++R + Sbjct: 79 NCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139
BLAST of CB304427 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 42/60 (70.00%), Postives = 55/60 (91.67%), Query Frame = -3 Query: 268 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 447 NCQKSKIFFI+W+P TSR+R+KMLYA+SKDRF+RELDGI E+QATDP+EM ++ +++RA Sbjct: 79 NCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138 The following BLAST results are available for this feature:
BLAST of CB304427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304427 ID=CB304427; Name=CB304427; organism=Citrus sinensis; type=EST; length=449bpback to top |