CB304474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.030e-20 Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP ++TN+K V S LS ++ V NI+ KP +YV + + +SFGG+ PAA+G L+SIGG+ P N+ SA + L KKL +PK+R +I F + G + GWNG+ F Sbjct: 1 MPIFTLNTNIKATDVP-SDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVNLNGDDVGWNGTTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP STNV + + L + +A ++GKPE+YV + + G ++FGGT+ PA +G+L+S+GG+ + N+ SA + L L +P +R +I F D +GS+ G+NGS F Sbjct: 1 MPIFTFSTNVPSENISVD-FLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGFGQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGSDVGYNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=BMBAC01P19.1 PE=3 SV=4) HSP 1 Score: 88.9669 bits (219), Expect = 2.337e-17 Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP I TN+ + + +S+ L +A++ VA +GKPE+YV I + G M FGG+EDP A L SIG + P VN + + +L +L +PK+R +I+F D + S+ +NGS F Sbjct: 1 MPYFTIDTNIPQNSI-SSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAFNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_XENLA (Macrophage migration inhibitory factor OS=Xenopus laevis GN=mif PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.583e-16 Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP I TNV D V ++LS+ T +A GKP Y+ I + MSFG + DP A L SIG + NK + + IL K+L++P +R +I +YD +N GWNGS F Sbjct: 1 MPVFTIRTNVCRDSVP-DTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIFH_WUCBA (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP I TN D + +S+ L +A + V +GKPE+YV I + G PM FGG+EDP L SIG + P VN + + +L +L +PK+R +I+ D + S+ +NGS F Sbjct: 1 MPYFTIDTNKPQDSI-SSAFLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAFNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_XENTR (Macrophage migration inhibitory factor OS=Xenopus tropicalis GN=mif PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP + TNV D + ++LS+ T +A GKP Y+ I + MSFG + DP A L SIG + NK S + L K++++P +R +I F+D +N GWNGS F Sbjct: 1 MPTFTVCTNVCRDSMP-DTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAVCSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHDLNPANVGWNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_CHICK (Macrophage migration inhibitory factor OS=Gallus gallus GN=MIF PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15 Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP I TNV D V S+L E T +A GKP Y+ + + MSFGG+ DP A L SIG + NK + + ++ K L V R +I ++D +N GWNGS F Sbjct: 1 MPMFTIHTNVCKDAVP-DSLLGELTQQLAKATGKPAQYIAVHIVPDQMMSFGGSTDPCALCSLYSIGKIGGQQNKTYTKLLCDMIAKHLHVSADRVYINYFDINAANVGWNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_RAT (Macrophage migration inhibitory factor OS=Rattus norvegicus GN=Mif PE=1 SV=4) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A L SIG + N+ S + +L +L + R +I +YD +N GWNGS F Sbjct: 1 MPMFIVNTNVPRASVP-EGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_MOUSE (Macrophage migration inhibitory factor OS=Mus musculus GN=Mif PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A L SIG + N+ S + +L +L + R +I +YD +N GWNGS F Sbjct: 1 MPMFIVNTNVPRASVP-EGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTF 114
BLAST of CB304474 vs. ExPASy Swiss-Prot
Match: MIF_MERUN (Macrophage migration inhibitory factor OS=Meriones unguiculatus GN=MIF PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.673e-13 Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = -2 Query: 216 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSPF 560 MP ++TNV V +LSE T +A GKP Y+ + + M+F G+ DP A L SIG + N+ S + +L +L + R +I +YD +N GWNGS F Sbjct: 1 MPMFIVNTNVPRSSVP-EGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGSSDPCALCSLHSIGKIGGAQNRTYSKLLCGLLADRLRISPDRIYINYYDMNAANVGWNGSTF 114 The following BLAST results are available for this feature:
BLAST of CB304474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304474 ID=CB304474; Name=CB304474; organism=Citrus sinensis; type=EST; length=648bpback to top |