CB304561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.420e-49 Identity = 93/109 (85.32%), Postives = 93/109 (85.32%), Query Frame = -1 Query: 98 MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNLALETI 424 MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGF LFGHASNSSRLDIVTKCPVPLVKMMGNLALETI Sbjct: 395 MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNSSRLDIVTKCPVPLVKMMGNLALETI 503
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.801e-36 Identity = 71/109 (65.14%), Postives = 82/109 (75.23%), Query Frame = -1 Query: 98 MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNLALETI 424 MIRG L+ +VWNGLWP+DRRC E YSFGMETLLKLDLKGTRR FDAFFDL+P YW GF LFGH SN +RLDIVTKCPVPLV+++GNLA+E++ Sbjct: 390 MIRGSQLYHRVWNGLWPLDRRCIGECYSFGMETLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRLSVKELAILSLCLFGHGSNLTRLDIVTKCPVPLVRLIGNLAIESL 498
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.794e-35 Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = -1 Query: 98 MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNLALETI 424 MIRG L+ +VWNGLWP DRR RE Y FGMETLLKLDL+GTRR FDAFFD++P YWHGF LFGHASN +RLDIVTKC VPLVK++GNLA+E++ Sbjct: 390 MIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLARLDIVTKCTVPLVKLLGNLAIESL 498
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.170e-27 Identity = 59/103 (57.28%), Postives = 69/103 (66.99%), Query Frame = -1 Query: 113 IRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNL 421 +RG L +VW LWPI+RR REF+ FGM+ LLKLDL TRRFFDAFFDL P+YWHGF LF HASN+SRL+I+TK VPL KM+ NL Sbjct: 394 LRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMTKGTVPLAKMINNL 496
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.385e-26 Identity = 57/101 (56.44%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 113 GRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNL 415 G L VW LWPI+RR REF+ FGM+ LLKLDL TRRFFDAFFDL P YWHGF LF HASN+SR +I+TK VPLV M+ NL Sbjct: 395 GNELSTAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRFEIMTKGTVPLVNMINNL 495
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25 Identity = 57/101 (56.44%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 113 GRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNL 415 G L VW LWPI+RR REF+ FGM+ LLKLDL TRRFFDAFFDL P YWHGF LF HASN+SRL+I+TK +PLV M+ NL Sbjct: 393 GDELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRLEIMTKGTLPLVHMINNL 493
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25 Identity = 55/103 (53.40%), Postives = 66/103 (64.08%), Query Frame = -1 Query: 113 IRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNL 421 + G L VW LWPI+RR REF+ FGM+ LLKLDL+GTRRFFDAFFDL P YWHGF LF HASN+ +L+I+ K +PLV M+ NL Sbjct: 396 LSGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVPFGLSLFSHASNTCKLEIMAKGTLPLVNMINNL 498
BLAST of CB304561 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.186e-25 Identity = 56/105 (53.33%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 101 GRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFXXXXXXXXXXXXXXXXLFGHASNSSRLDIVTKCPVPLVKMMGNLALET 415 G L VW LWPI+RR REF+ FGM+ LLKLDL TRRFFDAFFDL P YWHGF LF ASN+SR++I+TK +PLV M+ NL +T Sbjct: 395 GNELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFSRASNTSRIEIMTKGTLPLVNMINNLLQDT 499 The following BLAST results are available for this feature:
BLAST of CB304561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304561 ID=CB304561; Name=CB304561; organism=Citrus sinensis; type=EST; length=424bpback to top |