CB305021
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_ARATH (Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana GN=RPS3 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 1.103e-22 Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = -1 Query: 34 NKINFDPVVVLNHFVNPGVADPSTMGGANAQGRSLDKRIRSRIAFFVESLPSEKKCLAE 210 N+INFDPVVVLNHFV PG A+PSTMG ANAQGRSL KRIRSRIAFFVESL SEKKCLAE Sbjct: 247 NQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESLTSEKKCLAE 305
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_PETHY (Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.473e-22 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = -1 Query: 34 NKINFDPVVVLNHFVNPGVADPSTMGGANAQGRSLDKRIRSRIAFFVESLPSEKKCLAE 210 NKI+FDPVVVLNHFV PGVA+PSTMGGANAQGRSLDKRI S IAFFVE+ SEKKCLAE Sbjct: 247 NKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSEKKCLAE 305
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_ORYSJ (Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica GN=RPS3 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = -1 Query: 37 NKINFDPVVVLNHFVNPGVADPSTMGGANAQGRSLDKRIRSRIAFFVESLPSEKKCLA 210 NK++FDPVVVLNHFV PGVA+PSTMGG A+G SLDKRIRSRIAFFVES SEKKCLA Sbjct: 225 NKMHFDPVVVLNHFVAPGVAEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSEKKCLA 280
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_BRANA (Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = -1 Query: 34 NKINFDPVVVLNHFVNPGVADPSTMGGANAQG-RSLDKRIRSRIAFFVESLPSEKKCLAE 210 N++NFDPVVVLNHFV PG A+PSTMG AN G RSL KRIRSRIAFFVES SEKKCLAE Sbjct: 245 NQMNFDPVVVLNHFVAPGAAEPSTMGRANGTGDRSLQKRIRSRIAFFVESSTSEKKCLAE 304
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_OENBE (Ribosomal protein S3, mitochondrial OS=Oenothera bertiana GN=RPS3 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.664e-19 Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = -1 Query: 34 NKINFDPVVVLNHFVNPGVADPSTMGGANAQGRSLDKRIRSRIAFFVESLPSEKKCLAE 210 N+++FDP+VVLNHFV PGVA+PSTMGGAN QGRS + RIRSRIAFFVES SEKK LAE Sbjct: 248 NQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSEKKSLAE 306
BLAST of CB305021 vs. ExPASy Swiss-Prot
Match: RT03_MAIZE (Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.661e-19 Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = -1 Query: 37 NKINFDPVVVLNHFVNPGVADPSTMGGANAQGRSLDKRIRSRIAFFVESLPSEKKCLA 210 NK++FDPVVVLNHFV PGVA+PSTMGG A+G SLDKRIRSRIAFFVES S+KKCLA Sbjct: 246 NKMHFDPVVVLNHFVAPGVAEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSDKKCLA 301 The following BLAST results are available for this feature:
BLAST of CB305021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305021 ID=CB305021; Name=CB305021; organism=Citrus sinensis; type=EST; length=213bpback to top |