CB322166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.472e-46 Identity = 82/126 (65.08%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPF 379 L++ICPYWKFAY +ANV I EA+ E +HIIDFQIAQG+Q+MFL+ LAK PGG PL+R+TG+DDSQST+ARGGGL +VG+RL+ A SC VPFEF D M+ C+V+R+HL ++PG AVVVNFP+ Sbjct: 52 LYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKHPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHLGLEPGFAVVVNFPY 177
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.260e-39 Identity = 78/124 (62.90%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 L++ CPY+KF YMSAN I EAV+ E IHIIDF I+QG QW+ LL ALA RPGG P VRITGIDDS S +ARGGGL++VG+RLS A+ C VPFEF A++ +VE HL V PGEA+ VNF Sbjct: 254 LYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNF 377
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.566e-38 Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPF 379 L+++CPY+KF YMSAN I EA++ E+ +HIIDFQI QG+QW+ L+ A A RPGG P +RITGIDD S +ARGGGL IVG RL++ A NVPFEF +++ EV+ ++L V+PGEA+ VNF F Sbjct: 200 LYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAF 325
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.050e-36 Identity = 73/125 (58.40%), Postives = 91/125 (72.80%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFP 376 L++ CPY+KF Y SAN I EAV+NE +HIIDFQI+QG QW+ L+ AL RPGG P VRITGIDD +S+ AR GGL++VG+RL + A C VPFEF A+ EVE + L V+ GEA+ VNFP Sbjct: 307 LYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFP 431
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.410e-35 Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 L+ ICPY+KF YM+AN I EA+ E+ IHIIDFQIAQGTQW+ L+ ALA RPGG P VRITGIDD S +ARG GLDIVGK L + +P EF ++ A +V ++ L ++PGEA+ VNF Sbjct: 281 LYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNF 404
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.344e-28 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPF 379 L ++CPY+KF YMSAN I EA+++E IHIIDFQI QG+QW+ L+ A A RPGG+P +RITG+ D G L V KRL + A +VPF F + +CEVE ++L V+ GEA+ VNF + Sbjct: 130 LHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAY 248
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.974e-24 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 2 LFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPF 379 LF++CP +KF +++AN I EA++ E +HIIDF I QG Q+M L+ ++A+ PG P +R+TGIDD +S GGL I+G RL + A V F+F+ V L +PGE ++VNF F Sbjct: 302 LFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAF 427
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.734e-21 Identity = 54/121 (44.63%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 11 ICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 I P+ KF++ +AN I EA E E +HIID I QG QW L H LA RPGG P VR+TG+ S T L+ GKRLS+FA +PFEF A ++ + L V EAV V++ Sbjct: 532 ISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMET------LEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVHW 646
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.734e-21 Identity = 55/121 (45.45%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 11 ICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 I P+ KF++ +AN I EA E E +HIID I QG QW L H LA RPGG PLVR+TG+ S L+ GKRLS+FA +PFEF A ++ Q L V EAV V++ Sbjct: 503 ISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPLVRLTGLGTSME------ALEATGKRLSDFAQKLGLPFEFFPVADKVGNLDPQRLNVNKREAVAVHW 617
BLAST of CB322166 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.068e-20 Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 11 ICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNF 373 I P+ KF++ +AN I EA E E +HIID I QG QW L H LA RPGG P VR+TG+ S L+ GKRLS+FA + +PFEF A A V+ + L V EAV V++ Sbjct: 386 ISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASME------ALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREAVAVHW 500 The following BLAST results are available for this feature:
BLAST of CB322166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322166 ID=CB322166; Name=CB322166; organism=Citrus sinensis; type=EST; length=380bpback to top |