CB610765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_MAIZE (40S ribosomal protein S28 OS=Zea mays GN=RPS28 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.066e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1 Query: 79 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 MD+Q+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPV EGDILTL+ Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDILTLL 55
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS282_ARATH (40S ribosomal protein S28-2 OS=Arabidopsis thaliana GN=RPS28C PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.165e-19 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1 Query: 79 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+LTL+ Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDVLTLL 54
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS281_ARATH (40S ribosomal protein S28-1 OS=Arabidopsis thaliana GN=RPS28A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.987e-19 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1 Query: 79 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF D +R+IMRNVKGPVREGDILTL+ Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRYIMRNVKGPVREGDILTLL 54
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_ICTPU (40S ribosomal protein S28 OS=Ictalurus punctatus GN=rps28 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.474e-14 Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLL 59
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_DANRE (40S ribosomal protein S28 OS=Danio rerio GN=rps28 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.474e-14 Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLL 59
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_DROME (40S ribosomal protein S28 OS=Drosophila melanogaster GN=RpS28b PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14 Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 79 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 MD + A V+KV+GRTGS+GQ TQV+V+FL +QNR I+RNVKGPVREGDILTL+ Sbjct: 1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLL 55
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_RAT (40S ribosomal protein S28 OS=Rattus norvegicus GN=Rps28 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLL 59
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_PIG (40S ribosomal protein S28 OS=Sus scrofa GN=RPS28 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLL 59
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_MOUSE (40S ribosomal protein S28 OS=Mus musculus GN=Rps28 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLL 59
BLAST of CB610765 vs. ExPASy Swiss-Prot
Match: RS28_HUMAN (40S ribosomal protein S28 OS=Homo sapiens GN=RPS28 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 91 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLV 243 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+LTL+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLL 59 The following BLAST results are available for this feature:
BLAST of CB610765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610765 ID=CB610765; Name=CB610765; organism=Citrus sinensis; type=EST; length=513bpback to top |