CF417144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.834e-97 Identity = 137/160 (85.62%), Postives = 147/160 (91.88%), Query Frame = 2 Query: 2 TMALSSS-FVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 HSP 2 Score: 92.4337 bits (228), Expect = 1.834e-97 Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYRIAGGPLG V DPLYPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 215
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 2.393e-97 Identity = 138/160 (86.25%), Postives = 148/160 (92.50%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSS SF GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 HSP 2 Score: 90.5077 bits (223), Expect = 2.393e-97 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 215
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 2.393e-97 Identity = 136/159 (85.53%), Postives = 146/159 (91.82%), Query Frame = 2 Query: 2 TMALSSSFVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 T ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 163 HSP 2 Score: 90.5077 bits (223), Expect = 2.393e-97 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 214
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 9.044e-97 Identity = 136/158 (86.08%), Postives = 145/158 (91.77%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162 HSP 2 Score: 90.5077 bits (223), Expect = 9.044e-97 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 213
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.180e-96 Identity = 136/158 (86.08%), Postives = 144/158 (91.14%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162 HSP 2 Score: 90.8929 bits (224), Expect = 1.180e-96 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYRIAGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 213
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 3.418e-96 Identity = 136/160 (85.00%), Postives = 148/160 (92.50%), Query Frame = 2 Query: 2 TMALSSS-FVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 HSP 2 Score: 90.1225 bits (222), Expect = 3.418e-96 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVK 624 MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVK Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 3.418e-96 Identity = 136/160 (85.00%), Postives = 145/160 (90.62%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 HSP 2 Score: 93.5893 bits (231), Expect = 3.418e-96 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGA+EGYR+AGGPLG VTDPLYPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 215
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 4.459e-96 Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 2 Query: 2 TMALSSSFVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 T ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 163 HSP 2 Score: 87.4261 bits (215), Expect = 4.459e-96 Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYR+AG PLG V DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 169 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 214
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.901e-96 Identity = 137/158 (86.71%), Postives = 143/158 (90.51%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 +MALSS S GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV H RWAMLGALGCVFPELL+RNGVKFGEAVWF AG+QIFSEGGLDYLGNPSLIHAQSILAIWA Sbjct: 6 SMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 160 HSP 2 Score: 93.5893 bits (231), Expect = 9.901e-96 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYRIAGGPLG VTDP+YPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE 211
BLAST of CF417144 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.868e-95 Identity = 135/160 (84.38%), Postives = 145/160 (90.62%), Query Frame = 2 Query: 2 TMALSS-SFVGKAVNLAPSXNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVXHCRWAMLGALGCVFPELLARNGVKFGEAVWFXAGAQIFSEGGLDYLGNPSLIHAQSILAIWA 472 TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEV HCRWAMLGALGCVFPELLARNGVKFGEAVWF AG+QIFSEGGLDYLGNPSL+HAQSILAIWA Sbjct: 5 TMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164 HSP 2 Score: 92.0485 bits (227), Expect = 2.868e-95 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 490 MGAVEGYRIAGGPLGXVTDPLYPGGSFDPLGLADDPEAFAELKVKK 627 MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 215 The following BLAST results are available for this feature:
BLAST of CF417144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417144 ID=CF417144; Name=CF417144; organism=Citrus sinensis; type=EST; length=628bpback to top |