CF417151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.298e-48 Identity = 69/109 (63.30%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG 393 F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR ++ + W L GALG Sbjct: 13 FAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR-------ELEVIHCRWAML-GALG 112 HSP 2 Score: 85.1149 bits (209), Expect = 4.298e-48 Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 408 KFGEG---RVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE + GS+ FS+GGLDYLGNPSL+HAQS+LAIWA L + IAG LGE+ DPLYPGGSFDP+G+ Sbjct: 125 KFGEAGWFKAGSQ----IFSDGGLDYLGNPSLVHAQSLLAIWACQVVL-MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGL 200 HSP 3 Score: 81.2629 bits (199), Expect = 5.014e-15 Identity = 49/82 (59.76%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 326 LEVIHCRWAMLGALGCVFPELLARNGVQVR*GPCG-FKAGAQILQRGRA*LLGKPKLDPRPEHLGHLGFARWSWMGAVEGYR 568 LEVIHCRWAMLGALGCVFPELLARNGV+ G G FKAG+QI G LG P L + L + + MGAVEGYR Sbjct: 98 LEVIHCRWAMLGALGCVFPELLARNGVKF--GEAGWFKAGSQIFSDGGLDYLGNPSL-VHAQSLLAIWACQVVLMGAVEGYR 176
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.010e-43 Identity = 54/67 (80.60%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 127 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 321 GRI+MRKT +K SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNR Sbjct: 28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNR 94 HSP 2 Score: 82.0333 bits (201), Expect = 1.010e-43 Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGEG V + + FSEGGL + GNPSL+HAQSILAIWA L + +AG RLGEV DPLY GGSFDP+G+ Sbjct: 123 KFGEG-VWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVL-MGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGL 198 HSP 3 Score: 67.0106 bits (162), Expect = 9.785e-11 Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 326 LEVIHCRWAMLGALGCVFPELLARNGVQVR*GPCGFKAGAQILQRGRA*LLGKPKLDPRPEHLGHLGFARWSWMGAVEGY 565 LEVIHCRWA+ LGCVFPELLARNGV+ G FKAG+QI G G P L + + + + MGAVEGY Sbjct: 96 LEVIHCRWAIAVGLGCVFPELLARNGVKFGEG-VWFKAGSQIFSEGGLSHPGNPSL-VHAQSILAIWACQVVLMGAVEGY 173
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36 Identity = 90/165 (54.55%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 79 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG---PQ-RSPSSVR---AVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR ++ + S W L GALG P+ S + V+ AVW + GS S GL + ++ CQVVL G+ Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR-------ELEVIHSRWAML-GALGCVFPELLSRNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 160 HSP 2 Score: 89.3521 bits (220), Expect = 1.841e-17 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + IAG LGEVTDP+YPGGSFDP+G+ Sbjct: 114 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL 189
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 85/162 (52.47%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.729e-36 Identity = 85/162 (52.47%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 125 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 200
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.789e-36 Identity = 91/158 (57.59%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 79 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALG---PQ-RSPSSVR---AVWVQGGS-----------SDPS---ARAGLTTWETQ 489 GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR ++ + S W L GALG P+ S + V+ AVW + GS +PS A++ L W TQ Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR-------ELEVIHSRWAML-GALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQ 162 HSP 2 Score: 89.3521 bits (220), Expect = 1.841e-17 Identity = 50/78 (64.10%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSLIHAQSILAIWA L + IAG LGEVTDP+YPGGSFDP+G+ Sbjct: 122 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVIL-MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL 197
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35 Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + IAG LGEV DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35 Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS S GL + ++ CQVVL G+ Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 125 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGL 200
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35 Identity = 84/162 (51.85%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGSSDPSARAGLTTWETQA*STPRASWPSGLCQVVLDGS 552 F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW +GGS S + GL + ++ CQVVL G+ Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKGGSQIFS-QGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FS+GGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 126 KFGEA-VWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVL-MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGL 201
BLAST of CF417151 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35 Identity = 74/124 (59.68%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 73 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRXTRSHPLQMGHVGSSWMRLPGALGPQRSPSSVRAVWVQGGS 444 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNR + +G+ P L + AVW + GS Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS 135 HSP 2 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 408 KFGEGRVGSRRELRSFSEGGLDYLGNPSLIHAQSILAIWALPGGLGWEPLRVTEIAGXRLGEVTDPLYPGGSFDPIGV 641 KFGE V + + FSEGGLDYLGNPSL+HAQSILAIWA L + +AG LGEV DPLYPGGSFDP+G+ Sbjct: 124 KFGEA-VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVIL-MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 199 The following BLAST results are available for this feature:
BLAST of CF417151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417151 ID=CF417151; Name=CF417151; organism=Citrus sinensis; type=EST; length=656bpback to top |