CF417224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 272 FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR Sbjct: 439 FKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_ORYSJ (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39 Identity = 74/88 (84.09%), Postives = 85/88 (96.59%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 269 FKTEE+AI MANDTNAGLAAYIFT ++ R+WRVSEALEYGLVGVNEG+ISTEVAPFGGVKQSGLGREGSKYGMDE+LE+KY+C+G++N Sbjct: 440 FKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYICMGNLN 527
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 260 FK E + I ANDT GLAAY + +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G Sbjct: 397 FKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_PONPY (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FNTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_PANTR (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_PANPA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_HYLLA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_HUMAN (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_GORGO (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F TEEEAI +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 449 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: SSDH_RAT (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26 Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266 F EEEA+ +AN + GLA Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G + Sbjct: 437 FDKEEEAVAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523 The following BLAST results are available for this feature:
BLAST of CF417224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417224 ID=CF417224; Name=CF417224; organism=Citrus sinensis; type=EST; length=709bpback to top |