CF417265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417265 vs. ExPASy Swiss-Prot
Match: ISOA3_ARATH (Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30 Identity = 62/95 (65.26%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 1 SGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQVNCFMI 285 SGSSDLY+VN+RKPYH +NF+IAHDGFTL DLVSYN+KH SWNCGFEGET DA IK+LR+RQMKNFHLALM+SQ M+ Sbjct: 514 SGSSDLYQVNQRKPYHGVNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNFHLALMISQGTPMML 608 HSP 2 Score: 70.4774 bits (171), Expect = 1.035e-11 Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 3 Query: 615 VIQTGXPMMLMGDEYGHTRYGNNNSYGHDTAINNF 719 +I G PMMLMGDEYGHTRYGNNNSYGHDT++NNF Sbjct: 599 MISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNF 633
BLAST of CF417265 vs. ExPASy Swiss-Prot
Match: GLGX_MYCTU (Glycogen operon protein glgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 50/89 (56.18%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 1 SGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQ 267 +GSSDLY R+P SINF+ AHDGFTL DLVSYN KH SWNCG EG TDD I ALR+RQM+N LMVSQ Sbjct: 446 TGSSDLYEATGRRPSASINFVTAHDGFTLNDLVSYNDKHNEANGENNRDGESYNRSWNCGVEGPTDDPDILALRARQMRNMWATLMVSQ 534
BLAST of CF417265 vs. ExPASy Swiss-Prot
Match: GLGX_MYCBO (Glycogen operon protein glgX homolog OS=Mycobacterium bovis GN=glgX PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 50/89 (56.18%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 1 SGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQ 267 +GSSDLY R+P SINF+ AHDGFTL DLVSYN KH SWNCG EG TDD I ALR+RQM+N LMVSQ Sbjct: 446 TGSSDLYEATGRRPSASINFVTAHDGFTLNDLVSYNDKHNEANGENNRDGESYNRSWNCGVEGPTDDPDILALRARQMRNMWATLMVSQ 534
BLAST of CF417265 vs. ExPASy Swiss-Prot
Match: ISOA1_ARATH (Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 4 GSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQ 267 GS +LY+ RKP+HSINFI AHDGFTL DLV+YN K+ +SWNCG EG+ S+K LR RQM+NF ++LMVSQ Sbjct: 516 GSPNLYQ-GGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQ 602
BLAST of CF417265 vs. ExPASy Swiss-Prot
Match: GLGX_HAEIN (Glycogen operon protein glgX homolog OS=Haemophilus influenzae GN=glgX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 1 SGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDAS 207 +GSSDL++ N R P+ ++NFI AHDGFTL DLVSYN KH +S+N G EG T+ S Sbjct: 417 AGSSDLFKKNDRLPHTTLNFITAHDGFTLKDLVSYNQKHNETNGEENRDGRNENYSYNHGVEGSTESLS 485 The following BLAST results are available for this feature:
BLAST of CF417265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417265 ID=CF417265; Name=CF417265; organism=Citrus sinensis; type=EST; length=720bpback to top |