CF417388

Overview
NameCF417388
Unique NameCF417388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3485 contig Csv1_Contig3485:63..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.505e-38
Identity = 86/205 (41.95%), Postives = 121/205 (59.02%), Query Frame = 3
Query:   24 ACIGKLSIQNIYEPQCS--LDILRRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            +C G     N    +C   L+  ++ V  I +  I++ D   +LYS         C  + +  S  WAN K+V+KAL V EGTV  W RCN  ++Y  D+ S V YH+ ++ +GY+ LV+SGD DM+VP++ T+AWI+SLN +I   W+PW+V++QVAGY   Y  K    +TFATVKG GH   EY+P E   MI RW +  PL
Sbjct:  248 SCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKPDCM-WLYS---------CMANLHSLSEYWANEKSVRKALLVNEGTVRKWIRCNTEIAYNKDIRSSVPYHKYISIEGYRSLVFSGDHDMLVPFLGTQAWIRSLNYSIVDDWRPWMVQNQVAGYTRTYANK----MTFATVKGGGHTS-EYKPVETYIMIKRWLSGQPL 437          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.313e-36
Identity = 71/152 (46.71%), Postives = 103/152 (67.76%), Query Frame = 3
Query:  192 DNYFYSYN----WANNKAVQKALRVREGTVEYWTRCN-KSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D + Y Y     WANNK+V++AL+V +G++  W +CN K++SY  D+ S V YH K +  GY+ L+Y+GD DM+VP++AT+AWI+SLN +I   W+PW++  Q+AGY   Y  K    +TFAT+KG+GH   EY+PKE   M  RW ++ PL
Sbjct:  284 DCFLYRYTLITFWANNKSVREALQVNKGSIGKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSLIYNGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNK----MTFATIKGSGHTA-EYKPKETSIMFKRWISAQPL 430          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  192 DNYFYSYN----WANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D Y+Y Y+    WAN+++V++AL + +G+   W RCN+++ Y  D+ S + YH   +  GY+ L+YSGD D+ VP++AT+AWI+SLN +    W+PW++ +Q+AGY   Y  K    +TFAT+KG GH   EYRP E   M  RW +  PL
Sbjct:  288 DCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNK----MTFATIKGGGHTA-EYRPNETFIMFQRWISGQPL 433          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP52_ARATH (Putative serine carboxypeptidase-like 52 OS=Arabidopsis thaliana GN=SCPL52 PE=5 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33
Identity = 62/139 (44.60%), Postives = 92/139 (66.19%), Query Frame = 3
Query:  216 WANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            WAN++ V++AL++R+G++  W RCN ++ Y  D+ S + YH   +  GY+ L+YSGD DM VP++ATEAWI+SLN  I   W+PW++ +Q+AGY   Y  K    +T+AT+K +GH   EY+P E   M  RW +  PL
Sbjct:   51 WANDERVREALQIRKGSIGKWIRCNSNIHYDDDIISSIPYHMNNSINGYRSLIYSGDHDMEVPFLATEAWIRSLNYPIIDDWRPWIINNQIAGYTMTYANK----MTYATIKASGHTA-EYKPAESFIMFQRWISGQPL 184          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.393e-33
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 3
Query:  192 DNYFYSYN----WANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D Y+Y Y     WANN+ V++AL V +GT   W RCN ++ Y +++ S V YH   +  GY+ L+YSGD D+ +P+ AT+AWIKSLN +I   W+PW++  Q+AGY   Y  K    +TFATVKG GH   EY P E   M  RW +  PL
Sbjct:  292 DCYYYLYFLIECWANNERVREALHVTKGTKGQWQRCNWTIPYDNNIISSVPYHMDNSINGYRSLIYSGDHDITMPFQATQAWIKSLNYSIVDDWRPWMINDQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPNESSIMFQRWISGQPL 437          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.126e-33
Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  192 DNYFYSYN----WANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D Y+Y Y+    WANN++V++AL V +G++  W R ++ + Y SD+ S + YH   +  GY+ L++SGD D+ +P+ AT+AWIKSLN +I   W+PW+++ Q+AGY   Y  K    +TFATVKG GH   EY P+E   M  RW +  PL
Sbjct:  292 DCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPEESSIMFQRWISGQPL 437          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 3
Query:  165 SAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKG-YQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            S P+  C    Y  + +WAN++ V++ L V +G++  W RCN  L Y  D+ S V YHR  +  G Y+ LVYS D DM+VPY+ TEAWIKSLN +I   W+PW V +QV GY   Y      ++TFAT+KG GH   EY+P+E   M  RW +  PL
Sbjct:  313 SLPTPDCYMYRYLLASHWANDEDVRRELHVVKGSIGKWMRCNWDLPYEKDIKSSVPYHRNNSIIGDYRSLVYSSDHDMMVPYIGTEAWIKSLNYSITDDWRPWFVNNQVIGYTRTYAN----NMTFATIKGGGHTA-EYKPEESFMMFQRWISGRPL 464          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.964e-33
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 3
Query:  192 DNYFYSY----NWANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D Y Y Y     WAN++ VQ+AL V +G++  W RC   + Y  D+ S V YH   +  GY  L++SGD DM VPY+ T+AWI+SLN ++   W+PW++  Q+AGY   Y  K    + FAT+KG GH  PEY+P+E   M  RW +  PL
Sbjct:  292 DCYMYRYLLTTYWANDENVQRALHVNKGSIGEWVRCYFEIPYNHDIKSSVPYHMNNSIDGYASLIFSGDHDMEVPYLGTQAWIRSLNYSLIDDWRPWMIGDQIAGYTRTYANK----MAFATIKGGGHT-PEYKPEESYIMFQRWISGQPL 437          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32
Identity = 68/164 (41.46%), Postives = 95/164 (57.93%), Query Frame = 3
Query:  141 DFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            + +  P     S  C    Y  S  WANN+ V++AL+V EG+   W RC+ S+    D+ S + YH   + KGY+ LV SGD DM +P++ T+AWI+SLN +I   W+PW++  QVAGY   Y  K    +T ATVKG GH   EY+P+E   +  RW +  PL
Sbjct:  277 ELILKPKCETTSPDCYTYRYLLSIYWANNEIVRRALKVVEGSKGKWERCDLSVRSNQDIKSSIPYHMNNSIKGYRSLVISGDHDMTIPFLGTQAWIRSLNYSITEKWRPWMILDQVAGYTKTYANK----MTLATVKGGGHT-LEYKPEENSILFKRWISGQPL 435          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.006e-31
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  183 CRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            C    +  +  WAN++ V+KAL++ + ++  WTRC + + Y  D+ S V YH   +  GY+ L+YSGD D+ VP++ T+AWI+SLN +I   W+PW+++ Q+AGY   Y  K    +TFATV G GH   E+ PKE   M  RW    PL
Sbjct:  297 CYSYRFMLTTYWANDETVRKALQINKESIGEWTRCYRGIPYNHDIKSSVPYHMNNSIDGYRSLIYSGDHDIQVPFLGTQAWIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNK----MTFATVTGGGHTA-EFTPKETFMMFQRWINGQPL 441          
The following BLAST results are available for this feature:
BLAST of CF417388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
SCP17_ARATH5.505e-3841.95Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP13_ARATH2.313e-3646.71Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP8_ARATH1.658e-3443.05Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP52_ARATH1.403e-3344.60Putative serine carboxypeptidase-like 52 OS=Arabid... [more]
SCP10_ARATH2.393e-3345.70Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP9_ARATH3.126e-3343.71Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP18_ARATH4.083e-3345.22Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP7_ARATH6.964e-3343.71Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP14_ARATH7.699e-3241.46Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP4_ARATH1.006e-3141.33Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-318 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417388 ID=CF417388; Name=CF417388; organism=Citrus sinensis; type=EST; length=658bp
AAGCTGATCTTCAAAATATAACAGCGTGCATTGGAAAATTATCTATCCAG
AACATATATGAACCTCAATGTAGTTTAGATATACTCAGAAGACCAGTGCA
ATTCATATGGGATCGCGCCATCATCGAAGAAGATTCTTTTGATTTTCTCT
ATTCGCCAGTTCAATCAGCTCCAAGCCATTGGTGTCGGAAAGATAACTAT
TTCTACTCGTACAATTGGGCAAATAATAAAGCTGTGCAAAAGGCTCTGAG
AGTTCGGGAGGGGACAGTAGAATATTGGACGAGATGCAATAAAAGTTTGT
CTTACACATCTGATGTCTCAAGTGGTGTTGATTATCACCGAAAGCTCACC
AAGAAAGGCTATCAAGTTTTGGTTTACAGCGGAGATGTCGACATGGTAGT
TCCATATATGGCTACTGAAGCATGGATAAAGTCATTAAATTTGACGATTG
AAACTGGCTGGCAGCCGTGGTTGGTGGAAAGTCAAGTTGCAGGATATTGG
TACCGTTACAAGGGAAAGAACAATTATCATTTGACATTTGCCACAGTAAA
GGGAGCAGGTCATAATGGTCCAGAGTACAGGCCTAAGGAATGTCTTGCAA
TGATCGACAGGTGGNTCGCATCCTATCCTCTCTAGAGCCCCGTTCATATA
ATTATTAA
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