CF417444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.573e-35 Identity = 68/89 (76.40%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 2 RFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 268 RFSVGSGSPYAYGVLDSGYK+DMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELHYHYYPV P+T EQ M E Sbjct: 182 RFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEE 270
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.585e-35 Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 2 Query: 2 RFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 280 RFSVGSGSPYAYGVLD+GYK+DM++ IYHAT+RD ASGGV SVY+VGP+GWKK++GDDVG+LH+ YYPV P+TVEQEM EV GA Sbjct: 180 RFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDVGDLHFQYYPVVPATVEQEMVEVVGA 272
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.585e-35 Identity = 69/91 (75.82%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 2 RFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVA 274 RFSVGSGSPYAYGVLDSGYKFDMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELHYHYYPV P T E M E A Sbjct: 182 RFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 2 RFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 241 RFS GSGS YAYGVLD+G+K+DM+ +YHAT RDA SGG +VY+V +GWKK+S DD +L+ YY + P Sbjct: 187 RFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDDCFKLYQKYYNIVP 266
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 241 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 241 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 238 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+ Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 226 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG S+Y+V +GW ++S D+V +LH Y Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 258
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 241 FSVGSGS YA+GV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P Sbjct: 185 FSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYTSSIP 263
BLAST of CF417444 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 5 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 226 F+VGSGS YAYGVLD G + DM+ I+ A RDA SGG +VY+VGP GW+++S DV LH Y Sbjct: 181 FAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHDVAGLHDGY 254 The following BLAST results are available for this feature:
BLAST of CF417444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417444 ID=CF417444; Name=CF417444; organism=Citrus sinensis; type=EST; length=489bpback to top |