CF417522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 6.696e-99 Identity = 182/203 (89.66%), Postives = 195/203 (96.06%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADALV 609 KKGN+YF+RRPYIPVD+FLEG +LPTAK+AQ IADDVFSLFVSEEVDKVELLYTKFVSLVKS+PVIHTLLPLSP+GEICD+NG CVDAA DEFFRLTTKEGKLTVERD++RT+T FSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELA+RMSAMS+ATDNA ELKKNLS VYNRQRQAKITGEILEIVAGADALV Sbjct: 175 KKGNSYFIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGNCVDAANDEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQAKITGEILEIVAGADALV 377
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 4.063e-96 Identity = 176/203 (86.70%), Postives = 194/203 (95.57%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADALV 609 KKGN+YFLRRPYIPVD++LE G+LPTAKEAQ +ADDVFSLF+SEEVDKVELLYTKFVSLVKS+PVIHTLLPLSP+GEICD+NG CVDAAEDEFFRLTTKEGKLTVER+ RT TA FSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELA+RMSAMS+A+DNA +LKK+LS+VYNR+RQAKITGEILEIVAGA+A V Sbjct: 171 KKGNSYFLRRPYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANAQV 373
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2) HSP 1 Score: 343.584 bits (880), Expect = 6.486e-94 Identity = 174/203 (85.71%), Postives = 189/203 (93.10%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADALV 609 KKGN YF+RRP IPVDR+ +G +LPTAKEAQ IADDVFSLFVSEEVDKVE+LYTKFVSLVKSDPVIHTLLPLSP+GEICD+NG CVDAAEDE FRLTTKEGKLTVERD+++TET +FSPIL+FEQDP QILDALLPLYLNSQILRALQESLASELA+RM+AMSNATDNA ELKK LSI YNR RQAKITGEILEIVAGA+A V Sbjct: 162 KKGNTYFIRRPEIPVDRYFDGTNLPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGKCVDAAEDELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGANACV 364
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.223e-92 Identity = 173/198 (87.37%), Postives = 186/198 (93.94%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAG 594 +KGN+YF RRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKS+P+IHTLLPLSP+GEICD+NG CVDAAEDE FRLTTKEGKLTVERDV+R++T FSPILQFEQDPVQILDALLPLYLNSQILR LQESLASELA+RMSAMS+A DNA ELK +L+ VYNR QAKITGEILEIVAG Sbjct: 172 RKGNSYFNRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQAKITGEILEIVAG 369
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 9.692e-90 Identity = 167/202 (82.67%), Postives = 186/202 (92.08%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 KKGNAYF RRPYIP++R LE S+PT K++Q I D V+SLFVSEEVDKVELLY+KFVSLV+SDP+I TLLP+SP+GEICDVNGVCVDA EDE FRLTTKEGKLTVER+ V+ ET FSP++QFEQDPVQILDALLPLYLNSQILRALQESLASELA+RMSAMS+ATDNA+EL+KNLSI YNRQRQAKITGEILEIVAGADAL Sbjct: 156 KKGNAYFQRRPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCVDATEDELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGADAL 357
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.148e-82 Identity = 158/203 (77.83%), Postives = 176/203 (86.70%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSL-PTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 KKGNAYF RR VD+ +EGG + PT KEAQ IADDVFSLFVSEEVDKVEL+YTKFVSLVKSDPVIHTLLPLS +GE CDV G CVDA EDE FRLT+K+GKL VER + E SP++QFEQDPVQILDA++PLYLNSQILRALQESLASELASRM+AMSNATDNA+ELKKNL++ YNR RQAKITGE+LEIVAGA+AL Sbjct: 181 KKGNAYFSRRDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEAL 383
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.921e-63 Identity = 118/201 (58.71%), Postives = 157/201 (78.11%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603 +KG YF RR + + G+ P+ KEAQ IAD++F+ F+++E DKVEL++TKF+SL+ S+P I TLLP++P GE+CDV+G CVDAA+DE F+LTTK G+ VER+ ET + P L FEQ+P QILDALLPLY++S +LR+LQE+LASELA+RM+AM+NA+DNA ELKK L++ YN+QRQAKIT E+ EIV GA A Sbjct: 155 RKGAQYFARRKQYNIVKSFSLGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 355
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_VIGUN (ATP synthase subunit gamma, chloroplastic (Fragment) OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.322e-54 Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 154 LYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNA 495 LYTKFVSLVKSDPVIHTLLPLSP+GEICD+NGVCVDAAEDEFFRLTTKEGKLTVERDVVRT+T +SPILQFEQDPVQILDALLPLYLNSQILRALQESLASELA+RMSAMSNA Sbjct: 3 LYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDVVRTKTTDYSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNA 116
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP4 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpG PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54 Identity = 117/203 (57.64%), Postives = 148/203 (72.91%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR P+D G +PTA EA IAD++ SLF+SE VD+VEL+YTKFVSL+ S PV+ TLLPL P+G ++A +DE FRLTT+ G+ V+R+ V + T S + FEQDP+QILDALLPLYLN+Q+LRALQES ASELA+RM+AM+NA+DNA EL K LS+ YN+ RQA IT EILE+V GA+AL Sbjct: 122 RKAIQYFQRREQ-PIDATYTGLEQVPTAAEASQIADELLSLFLSESVDRVELVYTKFVSLISSRPVVQTLLPLDPQG---------LEAQDDEIFRLTTRGGRFEVQREKVSSATQSMPQDMIFEQDPLQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNAKELIKGLSMTYNKARQAAITQEILEVVGGAEAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.024e-54 Identity = 114/203 (56.16%), Postives = 149/203 (73.40%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR P+D G +PTA EA IAD + SLF+SEEVD++EL+YT+F+SLV S PV+ TLLPL P+G ++AA+DE FRLTT+ GK VER+ V ++ +P + FEQDPVQILD+LLPLYL++Q+LRALQES ASELA+RM+AMSNA++NA EL L++ YN+ RQA IT E+LE+V GA+AL Sbjct: 122 RKSTQYFQRRDQ-PIDATYSGLEQIPTAAEANQIADQLLSLFLSEEVDRIELIYTRFLSLVSSRPVVQTLLPLDPQG---------LEAADDEIFRLTTRGGKFEVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELINTLTLSYNKARQAAITQELLEVVGGAEAL 314 The following BLAST results are available for this feature:
BLAST of CF417522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417522 ID=CF417522; Name=CF417522; organism=Citrus sinensis; type=EST; length=727bpback to top |