CF417613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.767e-58 Identity = 92/179 (51.40%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA+TFSDLHTE G+KS++++L+GK+YISG+QL+ DD+KVYAAV VKP+D+FPNAS WY+SV+S+LA SF +DLFGD VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGAS LVPVGYG Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYG 179 HSP 2 Score: 70.8626 bits (172), Expect = 1.767e-58 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKL IM TI DDLVS D+LIE+ LT+EP NEYIQSCDIVAFN Sbjct: 179 GIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFN 222
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.339e-55 Identity = 91/183 (49.73%), Postives = 105/183 (57.38%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSF----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA+TFSDLHTE GLK+L+++L+GK+YISG+QL+ DD+KVYAAVL P D FPNAS WYDSV+S LA SF +DLF D VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGAS LVPVGYG Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYG 183 HSP 2 Score: 73.1738 bits (178), Expect = 1.339e-55 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKL IM+TI DDLVSVD+LIE+HLT+EP NEYIQS DIVAFN Sbjct: 183 GIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFN 226
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 5.486e-54 Identity = 87/180 (48.33%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA+TF+DLHT GLK+L+Q+LSGK+Y+SGN ++KDDIKV+AAV KP FPNA+ WYD+V++ LA F LDLFGD VLLDVKPWDDETDMKKLEEAVRSV+M GL WGAS LVPVGYG Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGD-ETEEDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYG 179 HSP 2 Score: 80.1073 bits (196), Expect = 5.486e-54 Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQIM+TI DDLVSVDSLIEEHLT EP NE++QSCDIVAFN Sbjct: 179 GIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFN 222
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.063e-45 Identity = 80/179 (44.69%), Postives = 103/179 (57.54%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA+TFSDLHT GLK+L+ +L+GK+YISG+ +TKDD+KV+AAV +KP+ FPNA+ WYD+V++ ++ F +DLFGD VL+D+KPWDDETDMKKLEEAVRSV+M GL WGAS L+PVGYG Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRF----PGQASGVSASSAPAAAAPAASKDEDDDDDMDLFGD--ETEEDKKAAAEREAAKPAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYG 173 HSP 2 Score: 58.9214 bits (141), Expect = 1.063e-45 Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQIM+TI DDL S IEE L P NEY+QSCDIVAFN Sbjct: 173 GIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFN 214
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 1.151e-44 Identity = 71/181 (39.23%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSS--RLAPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ P+ + N S WY+ V + R++ +DLFG+ VLLDVKPWDDETDM KLEEAVRS++M GL WGAS LV VGYG Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYG 181 HSP 2 Score: 78.9518 bits (193), Expect = 1.151e-44 Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQIM+TI DDLVSVD L+E++LTAEP NEYIQSCDIVAFN Sbjct: 181 GIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFN 224
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 6.112e-43 Identity = 72/181 (39.78%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS--FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MAIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N + WYD +S+ L S +DLFG+ VLLDVKPWDDETDM KLEEAVR+V+M GL WGAS LVPVGYG Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYG 181 HSP 2 Score: 73.1738 bits (178), Expect = 6.112e-43 Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQIM+TI DDLVSVDSLIE++ EP NE+IQSCDIVAFN Sbjct: 181 GIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFN 224
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.464e-41 Identity = 67/183 (36.61%), Postives = 90/183 (49.18%), Query Frame = 1 Query: 37 FSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS--------FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 F +L++++GLK LD++L +SYI+G Q +KDDI V+AA+ P + NAS WY+ + + L S +DLFG+ VL+D+KPWDDETDMKKLEEAV+S++M GLFWGAS LVPVGYG Sbjct: 4 FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYG 186 HSP 2 Score: 74.3294 bits (181), Expect = 1.464e-41 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQI+ TI DDLVS+D++IEE LT EP NEY+QSCDIVAFN Sbjct: 186 GIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFN 229
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.464e-41 Identity = 68/184 (36.96%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 25 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----LDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 MA++F+++ +E+GLK LD+YL +SYISG Q + DD+ VY+A P+ S+ N + W+ + + L S +DLFG+ VLLDVKPWDDETDM KLEEAVR+V+M GL WGAS LVPVGYG Sbjct: 1 MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYG 184 HSP 2 Score: 74.7146 bits (182), Expect = 1.464e-41 Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKLQIM+TI DDLVSVDSLIE++ EP NEYIQSCDIVAFN Sbjct: 184 GIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFN 227
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.065e-40 Identity = 67/183 (36.61%), Postives = 87/183 (47.54%), Query Frame = 1 Query: 37 FSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS--------FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 F +L++ SGLK LD++L +SYI+G Q +KDDI V+ A+ P F N S W++ + + L S +DLFG+ VL+D+KPWDDETDMKKLEEAVRS++M GLFWGAS LVPVGYG Sbjct: 4 FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYG 186 HSP 2 Score: 73.559 bits (179), Expect = 2.065e-40 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKL IM TI DDLVS+D++IEE LT EP NEY+QSCDIVAFN Sbjct: 186 GIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFN 229
BLAST of CF417613 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 4.772e-29 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 560 GIKKLQIMITIXDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFN 691 GIKKL IM+TI DDLVSVD+LIE++LT EP NEY+QSCDIVAFN Sbjct: 186 GIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFN 229 HSP 2 Score: 74.3294 bits (181), Expect = 4.772e-29 Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 436 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASXLVPVGYG 561 VLLDVKPWDDETDMKKLEEAVRSV+ GL GAS LVPVGYG Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYG 186 The following BLAST results are available for this feature:
BLAST of CF417613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417613 ID=CF417613; Name=CF417613; organism=Citrus sinensis; type=EST; length=693bpback to top |