CF417619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNE_HAEIN (Ribonuclease E OS=Haemophilus influenzae GN=rne PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRLLAMMEQKADPENPKSWPRFILRVDHHMCNYLTSGKRTRLA 512 D+N G E+ L+ NL AA +IAR+LRLR M ++R V ++ AV DR+ +++S +SR GL+E++R+R+ PS+ C CQGTG+V E+ I L ++E++A EN K V + +YL + KR ++ Sbjct: 302 DINSARST--RGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPIRHQREVENRIRDAVRPDRARIQISRISRFGLLEMSRQRLSPSLGESSHHICPRCQGTGKVRDNESLSLSI-------LRLLEEEALKENTKQVHTI---VPVQIASYLLNEKRKAIS 459
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNG_HAEIN (Ribonuclease G OS=Haemophilus influenzae GN=rng PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13 Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRL 392 D+N G GH + E+ I + N+ A K IA EL+LR M D ++ V + + A+ +DR V+ ++ GL+E+TRKR R S+ ++ + C C G GRV+ +ET +I +EI R+ Sbjct: 305 DINTG-AFVGH-RNLEETIFNTNIEATKAIAHELQLRNLGGIIIIDFIDMQTDEHRNRVLQSLCDALSKDRMKTNVNGFTQLGLVEMTRKRTRESLEHVLCDECPTCHGRGRVKTVETVCYEIMREIIRV 432
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNG_SHIFL (Ribonuclease G OS=Shigella flexneri GN=rng PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRL 392 D+N G GH + + I + N+ A + IAR+LRLR M ++ ++R V +++A+ +DR V+ S GL+E+TRKR R S+ ++ C C G G V+ +ET +I +EI R+ Sbjct: 304 DINTG-AFVGH-RNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRV 431
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNG_ECOLI (Ribonuclease G OS=Escherichia coli (strain K12) GN=rng PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRL 392 D+N G GH + + I + N+ A + IAR+LRLR M ++ ++R V +++A+ +DR V+ S GL+E+TRKR R S+ ++ C C G G V+ +ET +I +EI R+ Sbjct: 304 DINTG-AFVGH-RNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRV 431
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNG_ECOL6 (Ribonuclease G OS=Escherichia coli O6 GN=rng PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRL 392 D+N G GH + + I + N+ A + IAR+LRLR M ++ ++R V +++A+ +DR V+ S GL+E+TRKR R S+ ++ C C G G V+ +ET +I +EI R+ Sbjct: 304 DINTG-AFVGH-RNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRV 431
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNG_ECO57 (Ribonuclease G OS=Escherichia coli O157:H7 GN=rng PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRL 392 D+N G GH + + I + N+ A + IAR+LRLR M ++ ++R V +++A+ +DR V+ S GL+E+TRKR R S+ ++ C C G G V+ +ET +I +EI R+ Sbjct: 304 DINTG-AFVGH-RNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRV 431
BLAST of CF417619 vs. ExPASy Swiss-Prot
Match: RNE_ECOLI (Ribonuclease E OS=Escherichia coli (strain K12) GN=rne PE=1 SV=6) HSP 1 Score: 71.2478 bits (173), Expect = 5.189e-12 Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 3 Query: 3 DVNGGHGMFGHGSSKEKAILDVNLAAAKQIARELRLRXXXXXXXXXXXXMADDSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCTCCQGTGRVEALETSFSKIEQEISRLLAMMEQKADPENPKSWPRFILRVDHHMCNYLTSGKRTRLAVLSS 524 D+N G E+ + NL AA +IAR+LRLR M ++R V +++AV +DR+ +++S +SR GL+E++R+R+ PS+ C C GTG V E+ I L ++E++A EN + V + +YL + KR+ + + + Sbjct: 303 DINSARAT--RGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI-------LRLIEEEALKENTQEVHAI---VPVPIASYLLNEKRSAVNAIET 464 The following BLAST results are available for this feature:
BLAST of CF417619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417619 ID=CF417619; Name=CF417619; organism=Citrus sinensis; type=EST; length=657bpback to top |