CF417632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417632 vs. ExPASy Swiss-Prot
Match: PX11D_ARATH (Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 1.164e-78 Identity = 147/178 (82.58%), Postives = 159/178 (89.33%), Query Frame = 3 Query: 147 STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGXLGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 680 +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFRLFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAELLGRISLFCWMGSSVC+TLVE+G +GRLS+SM +E Y+AKLKKSNE Sbjct: 3 TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNE 180
BLAST of CF417632 vs. ExPASy Swiss-Prot
Match: PX11C_ARATH (Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.520e-78 Identity = 146/179 (81.56%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 144 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGXLGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 680 MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVFRLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE+LGRISLFCWMGSSVC++LVE+G LGRLS S+ NEQY+AK++KSNE Sbjct: 1 MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVFRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNE 179
BLAST of CF417632 vs. ExPASy Swiss-Prot
Match: PX11E_ARATH (Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.332e-74 Identity = 142/179 (79.33%), Postives = 156/179 (87.15%), Query Frame = 3 Query: 144 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGXLGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 680 M+TLD TRAELAL+VLYLNKAEARDKICRAIQYGSKFLS GQPGTAQ VDK+TSLARKVFRLFKFVND H LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER ELLGRISLFCW+GSSVC++ VE+G LGRLS+SM +E Y+AKL+KSN+ Sbjct: 1 MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDKNTSLARKVFRLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRISLFCWLGSSVCTSAVEIGELGRLSSSM----KKMEKELKADDELYRAKLQKSND 175
BLAST of CF417632 vs. ExPASy Swiss-Prot
Match: PX111_ORYSJ (Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.426e-68 Identity = 132/179 (73.74%), Postives = 150/179 (83.80%), Query Frame = 3 Query: 144 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGXLGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 680 MSTLDATRAEL LVVLYLNKAEARDKICRAIQYGSKF+S+GQPGTAQ+VD+ST+LARKVFRL K+VNDLH LISP +GTPL LVLLGKSKNALLSTFLFLDQ VWLGR+GIYKNKER + + RISL+CWM SSVC+ LVELG L RLS SM N+QY++K+K+S+E Sbjct: 1 MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDE 179
BLAST of CF417632 vs. ExPASy Swiss-Prot
Match: PX115_ORYSJ (Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.078e-68 Identity = 126/179 (70.39%), Postives = 150/179 (83.80%), Query Frame = 3 Query: 144 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGXLGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 680 MS+L++ RA+LAL++LYLNKAEARDKICRAIQYGSKF+S+GQPG AQNVDKSTSLARKVFRLFKFVNDLHALISP +GTPLPL+LLGKSKNALLSTFLFLDQ+VW GR+GIYKNKERAE L +I+ +C++GS+ C++++E+ L RLS SM NEQYQ KL+K NE Sbjct: 1 MSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDKSTSLARKVFRLFKFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQYQMKLQKCNE 179 The following BLAST results are available for this feature:
BLAST of CF417632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417632 ID=CF417632; Name=CF417632; organism=Citrus sinensis; type=EST; length=680bpback to top |