CF503919

Overview
NameCF503919
Unique NameCF503919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6974 contig Csv1_Contig6974:168..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503919 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.409e-58
Identity = 110/173 (63.58%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  183 CVVAEARSQQLKKTYVVHMDKSTMPATFNDHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTRTPEFLGLGK-SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSFSRGY 698
            C V+ + S Q   TY+VHM KS MP++F+ H  WYDSSL+S+S SA +LYTY+N IHGFSTRLT +EA+SL  QPG++SVLPE RYELHTTRTP FLGL + +  LFP +   S+V+VGVLDTGVWPE KS+ D G GP+P  WKG CE G NF +S CNRKLIGAR F+RGY
Sbjct:   20 CHVSSSSSDQ--GTYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAELLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEAGSYSDVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGY 190          
BLAST of CF503919 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 69/162 (42.59%), Postives = 95/162 (58.64%), Query Frame = 3
Query:  216 KKTYVVHMDKSTMP--ATFNDHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSFSRG 695
            K  Y+V+M +      +    H    +  + S  A  ++L+TYK   +GF+ +LT +EAE +    G+VSV      ELHTTR+ +FLG     T+   S+V+S ++VGVLDTG+WPE  SFDD G  P P  WKG CE   NF+   CNRK+IGARS+  G
Sbjct:   31 KNIYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIG 187          
BLAST of CF503919 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18
Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  192 AEARSQQLKKTYVVHMDK--STMPATFNDHFEWYDS-SLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSF 686
            A A  +  K  Y++++         T   H     S ++    A    +Y+Y    + F+ +L+  EA+ + +   +VSV      +LHTT++ +F+GL  +      +E   +VI+GVLDTG+ P+ +SF D G+GP P  WKG C   +NF  + CN K+IGA+ F
Sbjct:   27 ASAEDEHAKDFYIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLPLTAKRHLKAE--RDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNF--TGCNNKIIGAKYF 190          
The following BLAST results are available for this feature:
BLAST of CF503919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.409e-5863.58Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME5.222e-2942.59Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH1.862e-1832.14Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-407 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503919 ID=CF503919; Name=CF503919; organism=Citrus sinensis; type=EST; length=700bp
AGCAAGCGAATCTTTCTTTGGTCCTCGGTGAATCTCTCTTATGTTCTTAA
TTGAACTTCTAAAAACTCAAGCAACTAATAAATACCTCACCGAATTGTCT
CAACTCTACAACCTGAGGCTCCAATAAGATGTTGAAGTTGTGGCTTCTGC
AATTGAGTTTAGTTCTGATATTCTGCTACGCATGTGTTGTGGCAGAAGCG
AGGAGCCAGCAACTCAAAAAGACTTATGTAGTCCATATGGACAAGTCCAC
CATGCCAGCAACTTTCAACGATCACTTTGAATGGTATGACTCATCTTTAA
AGTCAGTATCAGCCTCTGCAGCCATGCTTTACACATACAAAAATGTAATT
CACGGCTTCTCCACAAGGCTAACTGCCAAGGAAGCAGAGTCACTTCAAAA
GCAACCGGGGATTGTCTCTGTTCTGCCTGAAGTCAGATATGAACTACACA
CAACTCGAACTCCAGAGTTCCTTGGATTGGGAAAGAGTGAAACTCTCTTC
CCTACATCTGAGGTACAGAGCGAGGTAATCGTCGGAGTCTTAGACACTGG
TGTATGGCCTGAGATCAAAAGCTTTGATGACACTGGAATGGGACCAGTAC
CAAGAGGCTGGAAAGGAGTGTGTGAGGTGGGTAGAAACTTCAAATCATCA
AGCTGTAATCGGAAACTAATTGGCGCAAGGTCATTCTCAAGAGGGTATGA
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