CF503962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_MOUSE (Kinesin-like protein KIF2C OS=Mus musculus GN=Kif2c PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.610e-43 Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLNK+EL++KE D+++V L VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A+ D+ L +QP YRN ++++++FEIY GK+FDLL ++ KL + ED RQQV +VGLQ++ V Sbjct: 260 RKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLV 435
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_MACFA (Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.118e-43 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQD 586 RKRPLNK+EL++KE D++++ L VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A+ D+ L +QP YR ++++++FEIY GKLFDLL ++ KL + EDG+QQV +VGLQ+ Sbjct: 210 RKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQE 382
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_HUMAN (Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2C PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 6.118e-43 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQD 586 RKRPLNK+EL++KE D++++ L VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A+ D+ L +QP YR ++++++FEIY GKLFDLL ++ KL + EDG+QQV +VGLQ+ Sbjct: 264 RKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQE 436
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_CRIGR (Kinesin-like protein KIF2C OS=Cricetulus griseus GN=KIF2C PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 6.118e-43 Identity = 89/176 (50.57%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLNK+EL++KE D+++V L VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A+ D+ L QP YRN ++++++FEIY GK+FDLL ++ KL + ED +QQV +VGLQ++ V Sbjct: 258 RKRPLNKQELAKKEIDVISVPSKCLLFVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNTSKGIYAMASRDVFLLKSQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSKQQVQVVGLQEYLV 433
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_RAT (Kinesin-like protein KIF2C OS=Rattus norvegicus GN=Kif2c PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 3.965e-42 Identity = 87/176 (49.43%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLNK+EL++KE D+++V L VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A+ D+ L +QP YR+ ++++++FEIY GK+F+LL ++ KL + ED +QQV +VGLQ++ V Sbjct: 210 RKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRSLNLEVYVTFFEIYNGKVFELLNKKAKLRVLEDSKQQVQVVGLQEYLV 385
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2B_MACFA (Kinesin-like protein KIF2B OS=Macaca fascicularis GN=KIF2B PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40 Identity = 84/176 (47.73%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLN++E + K+ DI+TV SDN + VHE K KVDLT Y+E FCFD D++ +N+ VY+ T +P++ +IF++ ATCFAYGQTGSGKT+TM + + A+D+ LL +Y K++ ++FEIYGGK++DLL +KKL + EDG QQ+ +VGLQ+ EV Sbjct: 216 RKRPLNQRETTLKDLDIITVPSDNVVMVHESKQKVDLTRYLENQTFCFDHAFDDKASNELVYQFTAQPLVESIFRKGMATCFAYGQTGSGKTYTMGGDFAGRAQDHSKGIYALVAQDVFLLLRNSIYEKLDLKVYGTFFEIYGGKVYDLLNWKKKLQVLEDGNQQIQVVGLQEQEV 391
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2C_XENLA (Kinesin-like protein KIF2C OS=Xenopus laevis GN=kif2c PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.847e-40 Identity = 88/176 (50.00%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLNK+ELS+KE DI++V S N + VHEPKLKVDLT Y+E F FD DE TN+ VYR T P++ +IF+ KATCFAYGQTGSGKT TM + + A+ D+ LL QP Y++ +++++FEIY GK+FDLL ++ KL + ED +Q+V +VGL + +V Sbjct: 268 RKRPLNKQELSKKEIDIISVPSKNIVLVHEPKLKVDLTKYLENQAFRFDFSFDETATNEVVYRFTARPLVQSIFEGGKATCFAYGQTGSGKTHTMGGDFSGKSQNVSKGVYAFASRDVFLLLDQPRYKHLDLDVFVTFFEIYNGKVFDLLNKKTKLRVLEDAKQEVQVVGLLEKQV 443
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2B_HUMAN (Kinesin-like protein KIF2B OS=Homo sapiens GN=KIF2B PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40 Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLN++E + K+ DI+TV SDN + VHE K KVDLT Y++ FCFD D++ +N+ VY+ T +P++ +IF++ ATCFAYGQTGSGKT+TM + + A+D+ LL Y K++ ++FEIYGGK++DLL +KKL + EDG QQ+ +VGLQ+ EV Sbjct: 219 RKRPLNQRETTLKDLDIITVPSDNVVMVHESKQKVDLTRYLQNQTFCFDHAFDDKASNELVYQFTAQPLVESIFRKGMATCFAYGQTGSGKTYTMGGDFSGTAQDCSKGIYALVAQDVFLLLRNSTYEKLDLKVYGTFFEIYGGKVYDLLNWKKKLQVLEDGNQQIQVVGLQEKEV 394
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2B_MOUSE (Kinesin-like protein KIF2B OS=Mus musculus GN=Kif2b PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 8.269e-40 Identity = 84/176 (47.73%), Postives = 116/176 (65.91%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLN++E + K+ DI+T+ S N + VHE K KVDLT Y+E FCFD D++ +N+ VY+ T P++ +IF++ ATCFAYGQTGSGKT TM + + A+D+ LL P Y K++ ++FEIYGGK++DLL +KKL + EDG QQV +VGLQ+ EV Sbjct: 219 RKRPLNQRETTMKDLDIITIPSHNVVMVHESKQKVDLTRYLENQTFCFDHAFDDKASNELVYQFTARPLVESIFRKGMATCFAYGQTGSGKTHTMGGAFLGKAQDCSKGIYALVAQDVFLLLKTPAYEKLELKVYGTFFEIYGGKVYDLLNWKKKLQVLEDGNQQVQVVGLQEQEV 394
BLAST of CF503962 vs. ExPASy Swiss-Prot
Match: KIF2A_RAT (Kinesin-like protein KIF2A OS=Rattus norvegicus GN=Kif2a PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 8.269e-40 Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 2 Query: 107 RKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQDFEV 595 RKRPLNKKE K+ D++T+ S + + VHEPK KVDLT Y+E F FD D+ N+ VYR T P++ TIF+R ATCFAYGQTGSGKT TM + + AA D+ +L +P Y+ +++ ++FEIY GK+FDLL + KL + EDG+QQV +VGLQ+ EV Sbjct: 228 RKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDCSGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREV 403 The following BLAST results are available for this feature:
BLAST of CF503962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503962 ID=CF503962; Name=CF503962; organism=Citrus sinensis; type=EST; length=597bpback to top |