CF504097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504097 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.111e-32 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 3 Query: 117 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQ 293 M+ GGD+ S A+PV Q H+AWR+YQ+YLDKTTPHA YRWIGTLV+ IYCLRV+Y+Q Sbjct: 1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQ 59 HSP 2 Score: 41.9726 bits (97), Expect = 7.111e-32 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 413 RGSDEFKPFIRRLPEFKF 466 RGSDEFKPFIRRLPEFKF Sbjct: 100 RGSDEFKPFIRRLPEFKF 117 HSP 3 Score: 39.2762 bits (90), Expect = 7.111e-32 Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 Query: 343 LLGFLSPLVDPEI-EVADGPLLPTKG 417 L+GFLSPLVDPE V+DGP LPT+G Sbjct: 76 LIGFLSPLVDPEAGGVSDGPSLPTRG 101
BLAST of CF504097 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.626e-31 Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 3 Query: 117 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYV 290 MEG GGD+ S A+PV + H+AWR+YQYYLDKTTPH+ RWIGTLV IYCLRV+ + Sbjct: 1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSI 58 HSP 2 Score: 45.0542 bits (105), Expect = 2.626e-31 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 1 Query: 343 LLGFLSPLVDPEIEVADGPLLPTKG 417 L+GFLSPLVDPE+EV+DG LPT+G Sbjct: 76 LIGFLSPLVDPELEVSDGATLPTRG 100 HSP 3 Score: 41.9726 bits (97), Expect = 2.626e-31 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 413 RGSDEFKPFIRRLPEFKF 466 RGSDEFKPFIRRLPEFKF Sbjct: 99 RGSDEFKPFIRRLPEFKF 116
BLAST of CF504097 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 1.044e-13 Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 3 Query: 135 DTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQ 293 D++S A V++ H + Q+ LDKT PH +YRWI L +V IY +RV++V+ Sbjct: 29 DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVE 81 HSP 2 Score: 36.1946 bits (82), Expect = 1.044e-13 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 413 RGSDEFKPFIRRLPEFKF 466 R SDE++PF+RRLPEFKF Sbjct: 121 RRSDEYRPFVRRLPEFKF 138 HSP 3 Score: 27.335 bits (59), Expect = 1.044e-13 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1 Query: 343 LLGFLSPLVDPEIEVADGPLLPTK 414 ++ FLSP DPE + G LPT+ Sbjct: 98 IIAFLSPQEDPEASLTSGGSLPTR 121 The following BLAST results are available for this feature:
BLAST of CF504097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504097 ID=CF504097; Name=CF504097; organism=Citrus sinensis; type=EST; length=486bpback to top |