CF504178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 2.336e-60 Identity = 110/141 (78.01%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 1 IEAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGL 423 +E QPLKK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKFRG EADINF+I+DY+DDLKQM+NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGL Sbjct: 112 VEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGL 252
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana GN=TOE3 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.567e-56 Identity = 104/140 (74.29%), Postives = 109/140 (77.86%), Query Frame = 1 Query: 4 EAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGL 423 E P+KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKFRG +ADINF IEDY DDLKQM NLTKEEF+HVLRRQSTGFPRGSSKYRGVTLHKCGRWE+R+GQFL KKYVYLGL Sbjct: 78 EISPPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGL 217
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 2.589e-51 Identity = 94/132 (71.21%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 10 PQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 405 P +KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKFRG +ADINF++ DYE+D+KQ+ NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK Sbjct: 137 PAQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 268
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: TOE2_ARATH (AP2-like ethylene-responsive transcription factor TOE2 OS=Arabidopsis thaliana GN=TOE2 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.205e-40 Identity = 81/129 (62.79%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 13 QPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLG 399 QP+KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT +KFRG EADINF I DYE+DLKQM+NL+KEE V VLRRQS+GF R +S+Y+GV L K G W A+M Q G Sbjct: 145 QPVKKSRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAVKFRGLEADINFVIGDYEEDLKQMANLSKEEVVQVLRRQSSGFSRNNSRYQGVALQKIGGWGAQMEQLHG 273
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: SMZ_ARATH (AP2-like ethylene-responsive transcription factor SMZ OS=Arabidopsis thaliana GN=SMZ PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.755e-34 Identity = 68/119 (57.14%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 19 LKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWE 375 +KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKFRG +ADINF ++DY D+ +M NL K EFV LRR+S F RGSSKY+G+ L KC +++ Sbjct: 109 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQFK 227
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: SNZ_ARATH (AP2-like ethylene-responsive transcription factor SNZ OS=Arabidopsis thaliana GN=SNZ PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.329e-30 Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYR 342 YRGVTFYRRTGRWESHIWD GKQVYLGGFDT I+FRG +ADINF ++DY+ D+++M NL+KEEFV LRR S RG SKY+ Sbjct: 109 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYK 202
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.528e-27 Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD GKQVYLG +D+ +K+ G + +NF E Y +L++M +TKEE++ LRRQS+GF RG SKYRGV H GRWEAR+G+ G KY+YLG Sbjct: 66 YRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLG 196
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: ANT_ARATH (AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana GN=ANT PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 2.607e-27 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 58 QYRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 QYRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NFS E+Y+ +++ M N+T++E+V LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 283 QYRGVTRHRWTGRYEAHLWDNSFKKEGHSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHTNFSAENYQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG 414
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.607e-27 Identity = 58/132 (43.94%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 58 QYRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 QYRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G +NF + +YE ++++++N+ ++EFV +LRR S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 223 QYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLG 354
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana GN=AIL5 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.446e-27 Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF I +YE +L++M ++T++EFV LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 204 YRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG 334 The following BLAST results are available for this feature:
BLAST of CF504178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504178 ID=CF504178; Name=CF504178; organism=Citrus sinensis; type=EST; length=425bpback to top |