CF504220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.686e-26 Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 227 MVSLKLQKRL+ASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA Sbjct: 1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 63
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.757e-26 Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 227 MVSLK+QKRL+ASV+KCG+GKVWLDPNE +ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA Sbjct: 1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 63
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 2.435e-25 Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 227 MVSLKLQKRL++SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 63
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.592e-24 Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 48 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 LKLQKRL+AS LKCG+GKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSR 59
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.786e-21 Identity = 43/63 (68.25%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 227 MVSLKLQKRL+AS+LKCG+G+VW+DPNE+ +++MANSR N+R+L+ GFI+RKP +HSRSRA Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRA 63
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 8.106e-21 Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 M SLKLQKRL+ASVL+CG+ KVWLDPNE+NEI+ NSRQNIRKL+KDG II+KP +HSR R Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 62
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.080e-20 Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 M +L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQNIRKLVKDG +IRKP +HSR R Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFR 62
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 5.254e-20 Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 M +L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP +HSR R Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFR 62
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.862e-20 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG IIRKP +HSR+R Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRAR 62
BLAST of CF504220 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.962e-20 Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 3 Query: 39 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSR 224 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRAR 62 The following BLAST results are available for this feature:
BLAST of CF504220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504220 ID=CF504220; Name=CF504220; organism=Citrus sinensis; type=EST; length=229bpback to top |