CF504248

Overview
NameCF504248
Unique NameCF504248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15
Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKID----STEEVKKLFQSGFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTI 489
            LM+ELL L+HL VL+ + + +L ++      +LVS  Q++   C      P  +L+   +  LQ L +  S + E+KID       E+K     GF+ L+ V++F  +  +DLTWL+F QNL+ L +   + +EEII+ +K   I+ +  +    F +LE L +
Sbjct:  718 LMEELLLLEHLKVLTATIKDALILESIQGVDRLVSSIQAL---CLRNMSAPVIILNTVALGGLQHLEIVGSKISEIKIDWERKGRGELKCTSSPGFKHLSVVEIFNLEGPRDLTWLLFAQNLRRLSVTLSLTIEEIINKEKGMSITNVHPNIVVPFGKLEFLEV 878          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.477e-13
Identity = 66/178 (37.08%), Postives = 93/178 (52.25%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKKLFQSGFRS--------LNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTIWMGINLKSVY 519
            L++EL  L+HL VL+ S +SSL V+K L  P+LV   Q + V  G+       VL L  M+NL ++ + +  + E+KI    E K L  S  RS        L+TV +  C   KDLTWL+F  NL  L +     VE II+ +K   +S II      F +LESL +     L+S+Y
Sbjct:  651 LVEELQLLEHLEVLNISIKSSLVVEKLLNAPRLVKCLQ-ILVLRGVQEESS-GVLTLPDMDNLNKVIIRKCGMCEIKI----ERKTLSLSSNRSPKTQFLHNLSTVHISSCDGLKDLTWLLFAPNLTSLEVLDSELVEGIINQEKAMTMSGIIP-----FQKLESLRLHNLAMLRSIY 817          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.107e-12
Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPP--FNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKKLFQSGFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTIWMGINLKSVY 519
            LMKEL  L+HL +++    S L  + F  YP++    Q +++    + RP     VL L  + NL  + +    + E+ I+ T   K L    F +L+ V +  C   KDLTWL+F  NL  L +  C  +E+IIS +K    + ++  E   F +LE L ++    LKS+Y
Sbjct:  651 LMKELQLLEHLELITTDISSGLVGELFC-YPRVGRCIQHIYIR-DHWERPEESVGVLVLPAIHNLCYISIWNCWMWEIMIEKTPWKKNLTNPNFSNLSNVRIEGCDGLKDLTWLLFAPNLINLRVWGCKHLEDIISKEK---AASVLEKEILPFQKLECLNLYQLSELKSIY 817          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKKLFQSG----FRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTIWMGINLKSVY 519
            L+KEL  L+HL V++    SSL  +  L   +LV   + V  +          VL L  M NL++L + +  + E+KI+ T       +S     F +L+ V +  C   KDLTWL+F  NL  L + F  +VE+IIS +K    S  I      F +LE+L ++    LK +Y
Sbjct:  651 LVKELQLLEHLEVITLDISSSLVAEPLLCSQRLVECIKEV--DFKYLKEESVRVLTLPTMGNLRKLGIKRCGMREIKIERTTSSSSRNKSPTTPCFSNLSRVFIAKCHGLKDLTWLLFAPNLTFLEVGFSKEVEDIISEEKAEEHSATIVP----FRKLETLHLFELRGLKRIY 818          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL5_ARATH (Probable disease resistance protein At1g51480 OS=Arabidopsis thaliana GN=At1g51480 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.599e-11
Identity = 49/181 (27.07%), Postives = 90/181 (49.72%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKK------------LFQSGFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTIWMGINLKSV 516
            LM+EL  + HL +L+ +   ++ +++     +L S  + +   C      P  VL    +  LQ+L +   ++ E+K+D   + ++                GF+ L++V++      +DL+WL+F QNLK L + F  ++EEII+ +K   I++ I      F +LESL I+    LK +
Sbjct:  648 LMEELQHMDHLKILTVTIDDAMILERIQGIDRLASSIRGL---CLTNMSAPRVVLSTTALGGLQQLAILSCNISEIKMDWKSKERREVSPMEIHPSTSTSSPGFKQLSSVNIMKLVGPRDLSWLLFAQNLKSLHVGFSPEIEEIINKEKGSSITKEIA-----FGKLESLVIYKLPELKEI 820          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11
Identity = 46/173 (26.59%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKKLFQS----GFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDKLGYISEIIGSEHNFFAQLESLTIWMGINLKSV 516
            +M+EL  LKHL +L+ +   ++ +++     +L S  + +   C      P  +L+   +  LQ+L +   ++ E++ID   + ++  +S    GF+ L ++ V      +DL+WL+F QNLK++ +Q+   +EEII+  K   I+++       F +LESL ++    L  +
Sbjct:  646 IMEELQRLKHLKILTATIEDAMILERVQGVDRLASSIRGL---CLRNMSAPRVILNSVALGGLQQLGIVSCNISEIEIDWLSKERRDHRSTSSPGFKQLASITVIGLVGPRDLSWLLFAQNLKDIQVQYSPTIEEIINKQKGMSITKVHRDIVVPFGKLESLHLYQLAELTEI 815          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 43/142 (30.28%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   10 LMKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLH-LAYMENLQELRLSQSDLEEMKIDSTEEVKKLF----QSGFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDK 420
            ++ EL  L++L  L+ +   +  +++FL   +L S T+++ +E      P  +V+  +A M++LQEL  + SD+ E+K+   E V  L      + F +L+ V + +C + +DLTWL+F  NL  L +    D++E+I+ +K
Sbjct:  645 VLNELQLLENLQTLTITLGLASILEQFLSNQRLASCTRALRIE---NLNPQSSVISFVATMDSLQELHFADSDIWEIKVKRNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRVISASDLKEVINKEK 783          
BLAST of CF504248 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 48/172 (27.91%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   13 MKELLGLKHLNVLSWSFRSSLAVQKFLKYPKLVSITQSVWVECGMYTRPPFNVLHLAYMENLQELRLSQSDLEEMKIDSTEEVKKLFQSGFRSLNTVDVFYCQKAKDLTWLVFVQNLKELFIQFCIDVEEIISVDK-LGYISEIIGSEHNF--FAQLESLTIWMGINLKSVY 519
            +KEL  L+HL +L+    S++ +++ +    L++  Q V + C +Y +     L L  M++L+ L +   ++ E++I+            F +L+ V +  C   KDLTWL+F  N+  L I+    ++E+IS  K  G   E     H    F +L+ L +     LKS+Y
Sbjct:  650 VKELHLLEHLEILTIDIVSTMVLEQMIDAGTLMNCMQEVSIRCLIYDQEQDTKLRLPTMDSLRSLTMWNCEISEIEIERLTWNTNPTSPCFFNLSQVIIHVCSSLKDLTWLLFAPNITYLMIEQLEQLQELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIY 821          
The following BLAST results are available for this feature:
BLAST of CF504248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DRL3_ARATH4.066e-1532.32Probable disease resistance protein At1g15890 OS=A... [more]
DRL1_ARATH8.477e-1337.08Probable disease resistance protein At1g12280 OS=A... [more]
RFL1_ARATH1.107e-1231.98Disease resistance protein RFL1 OS=Arabidopsis tha... [more]
RPS5_ARATH5.495e-1232.76Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL5_ARATH1.599e-1127.07Probable disease resistance protein At1g51480 OS=A... [more]
DRL32_ARATH2.727e-1126.59Probable disease resistance protein At5g43730 OS=A... [more]
DRL40_ARATH7.935e-1130.28Probable disease resistance protein At5g63020 OS=A... [more]
DRL23_ARATH7.935e-1127.91Putative disease resistance protein At4g10780 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-737 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504248 ID=CF504248; Name=CF504248; organism=Citrus sinensis; type=EST; length=524bp
GCTGAACCTTTGATGAAGGAATTGCTGGGTTTGAAGCATTTAAATGTTTT
AAGCTGGTCCTTCCGAAGTTCACTTGCTGTCCAAAAGTTTTTGAAATATC
CAAAGCTGGTTAGCATCACTCAATCTGTATGGGTTGAATGTGGCATGTAT
ACAAGGCCACCGTTCAATGTCTTACATCTAGCATATATGGAGAATCTTCA
GGAGTTGCGTCTTTCTCAGAGTGATTTGGAGGAGATGAAGATTGACAGCA
CAGAAGAGGTGAAGAAGCTTTTTCAAAGTGGTTTCCGCAGTCTCAACACA
GTTGATGTATTTTATTGCCAAAAAGCGAAGGACTTAACGTGGCTTGTTTT
TGTTCAAAACCTCAAGGAGCTATTTATACAGTTTTGTATTGATGTGGAAG
AAATAATCAGCGTTGATAAATTGGGATATATTTCAGAGATAATCGGGTCA
GAGCATAACTTTTTCGCACAACTCGAATCTCTAACCATATGGATGGGAAT
AAATTTAAAGAGCGTTTACCCGAA
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