CF504257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.993e-27 Identity = 36/39 (92.31%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGILFQLFYG+LGSW Sbjct: 50 SCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSW 88 HSP 2 Score: 62.003 bits (149), Expect = 7.993e-27 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 23 KMAADKXXXXXXXXXXXEMETEGKP-QNMKSKLSNFFWHGGSVYDAWFS 166 +MA DK EME+EGKP Q++KSKLSNF WHGGS YDAWFS Sbjct: 2 EMANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFS 50
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.025e-24 Identity = 36/39 (92.31%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGILFQLFYG+LGSW Sbjct: 48 SCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSW 86 HSP 2 Score: 53.9138 bits (128), Expect = 2.025e-24 Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 2 Query: 74 EMETEGKPQNMKSKLSNFFWHGGSVYDAWFS 166 EME +GK ++KSKLS+ FWHGGS YDAWFS Sbjct: 18 EMEKDGKALDIKSKLSDMFWHGGSAYDAWFS 48
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.820e-23 Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGM+SGILFQLFYGL+GSW Sbjct: 52 SCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGSW 90 HSP 2 Score: 50.8322 bits (120), Expect = 2.820e-23 Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 74 EMETE------GKPQNMKSKLSNFFWHGGSVYDAWFS 166 EME E K + K+KLSNFFWHGGSVYDAWFS Sbjct: 16 EMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFS 52
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.102e-22 Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGILFQ+FYGL+GSW Sbjct: 47 SCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSW 85 HSP 2 Score: 46.595 bits (109), Expect = 5.102e-22 Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 2 Query: 74 EMETEGKPQNMKSKLSNFFWHGGSVYDAWFS 166 E E EG ++ KLS FFWHGGSVYDAWFS Sbjct: 18 EREEEGS-KSTTGKLSKFFWHGGSVYDAWFS 47
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.540e-20 Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGM+SGI+FQ+FYGL+GSW Sbjct: 53 SCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSW 91 HSP 2 Score: 41.2022 bits (95), Expect = 7.540e-20 Identity = 18/31 (58.06%), Postives = 19/31 (61.29%), Query Frame = 2 Query: 74 EMETEGKPQNMKSKLSNFFWHGGSVYDAWFS 166 E E K + S NF WHGGSVYDAWFS Sbjct: 23 EEREEEKGASPGSGFKNFLWHGGSVYDAWFS 53
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.804e-20 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGI+ Q+FYGLLGSW Sbjct: 54 SCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSW 92 HSP 2 Score: 41.5874 bits (96), Expect = 9.804e-20 Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 110 SKLSNFFWHGGSVYDAWFS 166 S LSNF WHGGSV+DAWFS Sbjct: 36 SNLSNFLWHGGSVWDAWFS 54
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX3_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.731e-19 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSF+QLGM SG+LFQLFYGLLGSW Sbjct: 69 SCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSW 107 HSP 2 Score: 38.891 bits (89), Expect = 4.731e-19 Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 2 Query: 74 EMETEGKPQNMKSKLSNFFWHGGSVYDAWFS 166 E G+ +++LS WHGGS YDAWFS Sbjct: 39 ESSEMGEKTAARTRLSGLLWHGGSAYDAWFS 69
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.356e-18 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGIL Q+FYG+LGSW Sbjct: 54 SCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSW 92 HSP 2 Score: 37.7354 bits (86), Expect = 1.356e-18 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 86 EGKPQNMKSKLSNFFWHGGSVYDAWFS 166 E + ++ + NF WHGGSV+DAWFS Sbjct: 28 EEEVEDHSFSVKNFLWHGGSVWDAWFS 54
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX4_ORYSJ (Putative auxin transporter-like protein 4 OS=Oryza sativa subsp. japonica GN=Os11g0169200 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-18 Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGM SG+ FQ+FYGL+GSW Sbjct: 61 SCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSW 99 HSP 2 Score: 39.6614 bits (91), Expect = 1.357e-18 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 2 Query: 107 KSKLSNFFWHGGSVYDAWFS 166 K +S+ FWHGGSVYDAWFS Sbjct: 42 KLAVSSLFWHGGSVYDAWFS 61
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.982e-18 Identity = 33/39 (84.62%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSG+L Q+FYGL+GSW Sbjct: 53 SCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSW 91 HSP 2 Score: 37.3502 bits (85), Expect = 2.982e-18 Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 2 Query: 89 GKPQNMKSKLSNFFWHGGSVYDAWFS 166 G Q+ K +++ WHGGSV+DAWFS Sbjct: 28 GVEQDGKFSMTSLLWHGGSVWDAWFS 53 The following BLAST results are available for this feature:
BLAST of CF504257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504257 ID=CF504257; Name=CF504257; organism=Citrus sinensis; type=EST; length=283bpback to top |