CF504360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 5.803e-48 Identity = 92/98 (93.88%), Postives = 98/98 (100.00%), Query Frame = 1 Query: 76 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IFVFKFRTHFGGGKS+GFGLIYD+V+SAKKFEPKYRLIRNGL Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGL 98
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 9.264e-46 Identity = 87/98 (88.78%), Postives = 96/98 (97.96%), Query Frame = 1 Query: 76 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IF FKFRTHFGGGKS+G+GLIYD+V++AKKFEPKYRLIRNGL Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGL 98
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_RAT (40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_PONAB (40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_MOUSE (40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_MESAU (40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_HUMAN (40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 5.273e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_XENLA (40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.175e-32 Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL ++GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.534e-32 Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 1 Query: 76 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 M AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A+++ V DP +IF+F F+T FGGGKSTGFGLIYD+++ AKK+EPKYRL R GL Sbjct: 1 MDKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLFGFKTDFGGGKSTGFGLIYDNLEIAKKYEPKYRLARAGL 98 The following BLAST results are available for this feature:
BLAST of CF504360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504360 ID=CF504360; Name=CF504360; organism=Citrus sinensis; type=EST; length=369bpback to top |