CF504505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 5.973e-49 Identity = 103/145 (71.03%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LWIILVASCAAL+IQSLAANLGVVTG KHLAEHCR EY KVPNF+LWV+AEIA+VACDIPEVIGTAFALNMLF IPVWIGVLLTG STLILLALQQYG+RKLEFLIAFLVFT+A Sbjct: 73 LWIILVASCAALVIQSLAANLGVVTG--------------------------------KHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTIA 185
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.126e-47 Identity = 102/145 (70.34%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LWIILVASCAAL+IQSLAANLGVVTG KHLAE CR EY KVPNF+LWV+AEIA+VACDIPEVIGTAFALNMLF IPVWIGVLLTG STLILLALQ+YGVRKLEFLIAFLVFT+A Sbjct: 81 LWIILVASCAALVIQSLAANLGVVTG--------------------------------KHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQKYGVRKLEFLIAFLVFTIA 193
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.092e-24 Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--KIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LWI+L+A+ L++Q LAA LGVVTG+ HLAE C +YPKVP ILW++ E+AI+ D+ EVIG+A A+N+L +IP+W GVL+T T + L L +YG+RKLE FL+ MA Sbjct: 105 LWILLLATLVGLLLQRLAARLGVVTGL--------------------------------HLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMA 219
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24 Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--KIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LW++L+A+ L++Q LAA LGVVTG+ HLAE C +YPKVP ILW++ E+AI+ D+ EVIG+A A+N+L ++P+W GVL+T T + L L +YG+RKLE FL+ MA Sbjct: 105 LWVLLLATIVGLLLQRLAARLGVVTGL--------------------------------HLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMA 219
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.352e-23 Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--KIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LW++L+A+ L++Q LAA LGVVTG+ HLAE C +YPKVP ILW++ E+AI+ D+ EVIG+A A+N+L ++P++ GVL+T T + L L +YG+RKLE FL+ MA Sbjct: 105 LWVLLLATIVGLLLQRLAARLGVVTGL--------------------------------HLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLYGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMA 219
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.139e-22 Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFK--IPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LW++ ++ +Q LA+ LGVVTG KHLAEHCR +YPK P +LW++ E+AI+ DI EVIGTA AL +L IP+W GVL T T L L++YG+RKLE L+ MA Sbjct: 109 LWVLFWSTVIGFWLQMLASRLGVVTG--------------------------------KHLAEHCREQYPKTPRLLLWLMTELAIIGSDIQEVIGTAIALQILSNGHIPLWAGVLFTAADTFTFLFLEKYGIRKLEAFFCSLIAIMA 223
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.062e-21 Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFK--IPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 +W+++ A+ L+IQ L+A LGV TG +HLAE CR EYP +LW++AEIA++ DI EVIG+A A+ +L +P+W GV++T I L L+ YG+RKLE + A L+ TMA Sbjct: 87 IWLLMWATAIGLLIQLLSARLGVATG--------------------------------RHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITALDCFIFLFLENYGIRKLEAVFAILIATMA 201
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.365e-21 Identity = 58/147 (39.46%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFK--IPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LW++L A+ L++Q LAA LGVVTG+ HLAE C +Y ++P +ILW++ EIAI+ D+ EVIGTA A+ +L +P+W GVL+T T L L +YG+RKLEFL L+ MA Sbjct: 112 LWVLLWATVLGLLMQRLAARLGVVTGL--------------------------------HLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLFGTLITIMA 226
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.034e-21 Identity = 54/147 (36.73%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFK--IPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435 LW++L A+ L++Q L+A +GV TG +HLAE CR+EYP +LW +AE+A++ DI EVIG+A AL +L + +P+W+GV++T F ++ L++ G+RKLE L A L+ TMA Sbjct: 105 LWLLLWATLMGLLMQLLSARIGVATG--------------------------------RHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVGVIITSFDCFLISYLEKCGMRKLEGLFAVLIATMA 219
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.882e-21 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFK--IPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432 LW+++ A+ L++Q L+A LGV TG +HLAE CR+EYP +LWV+AE+A++ DI EVIG+A A+ +L +P+W GV++T + L L+ YG+RKLE + A L+ TM Sbjct: 91 LWLLMWATAMGLLVQLLSARLGVATG--------------------------------RHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFLFLENYGIRKLEAVFAVLIATM 204 The following BLAST results are available for this feature:
BLAST of CF504505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504505 ID=CF504505; Name=CF504505; organism=Citrus sinensis; type=EST; length=440bpback to top |