CF504635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.428e-28 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 482 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLQMN 664 MAL SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSL N Sbjct: 1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNN 61 HSP 2 Score: 41.2022 bits (95), Expect = 8.428e-28 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVYPYK+IIKTCGTTK Sbjct: 72 SLFVYPYKIIIKTCGTTK 89 HSP 3 Score: 21.1718 bits (43), Expect = 8.428e-28 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 652 VANEHLDSYVLSE 690 ++N +DSYVLSE Sbjct: 58 LSNNEVDSYVLSE 70
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.208e-27 Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 2 Query: 482 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SL Sbjct: 3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSL 60 HSP 2 Score: 38.1206 bits (87), Expect = 2.208e-27 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 74 SLFVYSYKIIIKTCGTTK 91
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.106e-27 Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 2 Query: 482 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLQMN 664 MAL SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSL N Sbjct: 1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNN 61 HSP 2 Score: 41.2022 bits (95), Expect = 3.106e-27 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVYPYK+IIKTCGTTK Sbjct: 72 SLFVYPYKIIIKTCGTTK 89 HSP 3 Score: 21.1718 bits (43), Expect = 3.106e-27 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 652 VANEHLDSYVLSE 690 ++N +DSYVLSE Sbjct: 58 LSNNEVDSYVLSE 70
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.033e-27 Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 2 Query: 482 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLQMNIL 670 MALP SAIGFEGYEKRLE+SFFE FADP G+GLR+L+K Q+DEIL+PAECTIV SL L Sbjct: 1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYL 63 HSP 2 Score: 41.2022 bits (95), Expect = 4.033e-27 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVYPYK+IIKTCGTTK Sbjct: 72 SLFVYPYKIIIKTCGTTK 89 HSP 3 Score: 23.8682 bits (50), Expect = 4.033e-27 Identity = 9/13 (69.23%), Postives = 13/13 (100.00%), Query Frame = 1 Query: 652 VANEHLDSYVLSE 690 ++N++LDSYVLSE Sbjct: 58 LSNQYLDSYVLSE 70
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.255e-27 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 2 Query: 485 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SL Sbjct: 4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSL 60 HSP 2 Score: 38.1206 bits (87), Expect = 8.255e-27 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 74 SLFVYSYKIIIKTCGTTK 91
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.153e-25 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 479 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +L Sbjct: 2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNL 60 HSP 2 Score: 38.1206 bits (87), Expect = 1.153e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 74 SLFVYSYKIIIKTCGTTK 91
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.541e-25 Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 479 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK QLDEIL PAECTIV +L Sbjct: 2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNL 60 HSP 2 Score: 38.1206 bits (87), Expect = 2.541e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 74 SLFVYSYKIIIKTCGTTK 91
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.307e-25 Identity = 46/58 (79.31%), Postives = 52/58 (89.66%), Query Frame = 2 Query: 482 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K QLDEIL PAECTIV +L Sbjct: 1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNL 58 HSP 2 Score: 38.1206 bits (87), Expect = 3.307e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 72 SLFVYSYKIIIKTCGTTK 89
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-25 Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 488 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL Sbjct: 1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSL 56 HSP 2 Score: 38.1206 bits (87), Expect = 3.389e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 70 SLFVYAYKIIIKTCGTTK 87 HSP 3 Score: 23.8682 bits (50), Expect = 3.389e-25 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 652 VANEHLDSYVLSE 690 +ANE +DSYVLSE Sbjct: 56 LANEDVDSYVLSE 68
BLAST of CF504635 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.705e-25 Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 488 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSL 655 + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL Sbjct: 1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSL 56 HSP 2 Score: 37.3502 bits (85), Expect = 5.705e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 693 SLFVYPYKVIIKTCGTTK 746 SLFVY YK+IIKTCGTTK Sbjct: 70 SLFVYAYKLIIKTCGTTK 87 HSP 3 Score: 23.8682 bits (50), Expect = 5.705e-25 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 652 VANEHLDSYVLSE 690 +ANE +DSYVLSE Sbjct: 56 LANEDVDSYVLSE 68 The following BLAST results are available for this feature:
BLAST of CF504635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504635 ID=CF504635; Name=CF504635; organism=Citrus sinensis; type=EST; length=746bpback to top |