CF832070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.270e-65 Identity = 122/197 (61.93%), Postives = 150/197 (76.14%), Query Frame = 3 Query: 21 LQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL--XXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIPPPP 605 +QS+FDRLL EH RK+AE YA++PLDADNLTRWG ALLELSQF+ V++SK++I++A SK EEAL ++P KH LW LGNAHTS FLT D+ EAK F+KA++CFQ+A D +P+N+LY+KSLEV+ KAPELHME+H+HG QQT+ DLKYDIFGWVILAVGIVAWVG A S +PPPP Sbjct: 3 MQSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTMAAEPSTSTSTKSSKKTKSSDLKYDIFGWVILAVGIVAWVGFAKSNMPPPP 199
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.174e-52 Identity = 102/199 (51.26%), Postives = 134/199 (67.34%), Query Frame = 3 Query: 24 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL---XXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 611 +++FDR+LL E R+ AE Y +PLDADNLTRWG LLELSQF S+SD+K++I EAI+KFEEAL+IDP K +W +GNA+TS FLT D +EAK +FD A++ FQ+AVDE+P N Y KSLE++ KAP+LH E +K G+ Q + D KYD GWVILA+G+VAW+ A + +P P R Sbjct: 4 ETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPMGRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFAKANVPVSPPR 202
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.057e-51 Identity = 102/205 (49.76%), Postives = 132/205 (64.39%), Query Frame = 3 Query: 27 SDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL----------XXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 611 +DF+RL++ EH RK +EA Y DPLD++NL +WG ALLELSQF+ + ++K ++N+AISK EEAL I+P KH LW + NA+T+ F D EAK FDKA+E FQRA +E+P N+ Y+KSL+ S KAPELHM+ G+ QQ L + YD+ GW+ILA GIVAWVGMA S PPPPAR Sbjct: 6 ADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWIILACGIVAWVGMAKSLGPPPPAR 210
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 4.015e-47 Identity = 95/195 (48.72%), Postives = 125/195 (64.10%), Query Frame = 3 Query: 27 SDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 611 SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A SK EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + D YD+FGWV+L VG+V WVG+A S PP R Sbjct: 7 SDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 201
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.573e-46 Identity = 95/196 (48.47%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 27 SDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT-LXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 611 SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A SK EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + D YD+FGWV+L VG+V WVG+A S PP R Sbjct: 7 SDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 202
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.878e-45 Identity = 96/192 (50.00%), Postives = 128/192 (66.67%), Query Frame = 3 Query: 21 LQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSRIP 596 +Q++ +RL++ EH RK AEA Y K+PLDA+NLTRW ALLELSQF++ + K++I EAI K EALVIDP KH LW +GNAH S GFL++D +EA +F+KAS+ FQ AV+E+P +ELY+KSL +++KAPELH + KYD+FGWVILA +VAW+ ANS+ P Sbjct: 3 MQNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQT--EPKQMILEAILKLGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHTG---------GTAGPSSNSAKTMKQKKTSEFKYDVFGWVILASYVVAWISFANSQTP 183
BLAST of CF832070 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36 Identity = 85/187 (45.45%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 36 DRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT--LXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGMANSR 590 D+L E RK AE Y +P DADNL RWGEALLELSQF++V DS K+I +AISK E+A++IDP KH +W LGNA+TS LT D ++A+ +F A F AV ++P N++Y KSLE++ KAP+LH HK+ + + D KY + GWVILA+G+VA + R Sbjct: 2 DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETLAIPSPKVVKNKKSSDEKYIVMGWVILAIGVVACISFRKLR 188 The following BLAST results are available for this feature:
BLAST of CF832070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832070 ID=CF832070; Name=CF832070; organism=Citrus sinensis; type=EST; length=792bpback to top |