CF832139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.347e-30 Identity = 69/181 (38.12%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 5 IVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQ-VHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 +++ E W Y+IFWQP D +G VL WGDGY++G +D A + P + RKKV +E+ + G D VD +VTD EW++ VS+T+SFA G G A G+ F++G+ VW++G +L CER K+ + G+ T+ C+ +A GVVE+GS++ I++ L+ + LF Sbjct: 75 LIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFSTPADQEY--RKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFACGAGLA-GKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIRQSSDLINKVRILF 252
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.746e-26 Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 5 IVQNRPEWWVYSIFWQPL-------KDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQ-VHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 +++ E W Y++FWQ + N ++L WGDGY++G ++ + + + A + RK+V +E+ + G D D +VTD EW++ VS+T+SF G G G+ FS+ D +WL+G + L CER ++ +++G+QT+VCV+T GVVELGSS++I + LV + F Sbjct: 70 LIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSNPASAAEQE------HRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGLP-GQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFF 250
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.666e-23 Identity = 62/186 (33.33%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 5 IVQNRPEWWVYSIFWQPLKDVNGR-----LVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDL-DRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 ++++ E W Y+IFWQ D + ++L WGDGY++G +D K+ N RK+V +E+ + + D D +VTD EW++ VS+T+SF G G G F + +WL+G L CER + +++G++T+VC++T GVVELGSS++I + L+ +LF Sbjct: 59 LIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEED--------KEKKKNNTNTAEQEHRKRVIRELNSLISGGIGVSDESNDEEVTDTEWFFLVSMTQSFVNGVGLP-GESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVISQSSDLMHKVNNLF 235
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.753e-18 Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 5 IVQNRPEWWVYSIFWQP-LKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQG---AGNEPKFGFFLERKKVSKEVQVHFGEDM------DLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFG 547 ++ E W Y+IFW+P D +G VL WGDG + G + TR ++ + E K R V +E+ + + D+ D +VTD EW++ VS+T SF G G A G+ F+S + V +TG + C+R K+ G+QT++C+ + GV+EL S++ I+ + L + LFG Sbjct: 41 VLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTILSSPEEKE----RRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGNGSGLA-GKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFG 226
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: GL3_ARATH (Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.395e-16 Identity = 56/185 (30.27%), Postives = 83/185 (44.86%), Query Frame = 2 Query: 29 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAA-------AGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDG------DVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 W Y IFW +G VL WGDGY+ G D TR A + G + E V++ + R D+ D EWYY V ++ F IG+G GR F++G+ +WL H R A+ ++T+VC GVVE+G+++ I ED +++Q K+ F Sbjct: 27 WSYGIFWSVSASQSG--VLEWGDGYYNG--DIKTRKTIQASEIKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMP-GRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQCVKTSF 206
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16 Identity = 55/183 (30.05%), Postives = 85/183 (46.45%), Query Frame = 2 Query: 2 FIVQNRPEWWVYSIFWQPL-KDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFG 547 F+V+ P+ W Y IFWQ + D + R L W DG+F G+K+ + + + ++ + M+DG D E +Y S G+ + + S VWLTG EL+ ER KEA HG+ TLV + G++ELGSS+ I ++ + + KS+FG Sbjct: 41 FVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKN---------------------------NNSQENYTTNSIECELMMDGG-DDLELFYAASF-----YGEDRSPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFG 190
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: TT8_ARATH (Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.859e-15 Identity = 58/178 (32.58%), Postives = 86/178 (48.31%), Query Frame = 2 Query: 29 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHF--GEDMDLDRMVDG----DVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 W YS+FWQ + VL WG+GY+ G+ TR E LER + +E+ GE R D+T+ EW+Y + V+ SF G G+ ++ +VWL+G +E+ R A+ IQT+VC+ GVVELG++ ++ED V+L KS F Sbjct: 33 WTYSVFWQFCPQ---QRVLVWGNGYYNGA--IKTRKTTQPAEVTAEEAA---LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMP-GKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFF 201
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.346e-15 Identity = 61/173 (35.26%), Postives = 85/173 (49.13%), Query Frame = 2 Query: 29 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGD-VTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 W Y+IFWQ + G LVL WGDGY R K+ G E + + RK+V +++ FG + + + D VTD E + S+ SF G+G G+ F+S VWL+ C R A+ GIQT+V V T GVVELGS+ + E + +SLF Sbjct: 66 WNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTM-RKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGP-GKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLF 236
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.041e-13 Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 2 Query: 29 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGN---EPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSALGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF 544 W Y+IFWQ +G+ VL WGDG R + N E + + ++ + K ++ G D D + VT E ++ S+ F G+G GR +SSG +VWL+ + C R A+ GI+T+V V T GV+ELGS + E+ LV+ ++LF Sbjct: 66 WNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGP-GRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALF 239
BLAST of CF832139 vs. ExPASy Swiss-Prot
Match: BH012_ARATH (Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 56/184 (30.43%), Postives = 81/184 (44.02%), Query Frame = 2 Query: 29 WVYSIFWQPLKDVNGRLVLSWGDGYFRGS-----KDFATRAAAGKQGAGNEPKFGF-FLERKKVSKEVQVHFGEDMDLDR-------MVDGDVTDGEWYYTVSVTRSFAIGDGSAL-GRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKS 538 W Y+IFW G VL WG+G + G K + + G Q + K LE + H + D D + D++D EWYY VS+ S+ L GR ++G+ +WL + R AR IQT+VC GV+ELG ++LI ED +L++ KS Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSM--SYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDHNLLRNIKS 215 The following BLAST results are available for this feature:
BLAST of CF832139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832139 ID=CF832139; Name=CF832139; organism=Citrus sinensis; type=EST; length=566bpback to top |