CF832149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 9.481e-68 Identity = 122/141 (86.52%), Postives = 130/141 (92.20%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 425 M T K VKDVSPH+FVKAYA+HLKRSGKIELPTW DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ NI+ELD+KGGRRITSSGQRDLDQVAGRIAV Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAV 141
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 4.705e-67 Identity = 122/140 (87.14%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 M T K VKDVSPHEFVKAYAAHLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG VARHIL QLQ NI++LD+KGGR+ITSSGQRDLDQVAGRIA Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIA 140
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 3.983e-66 Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 M T K VKDVSPH+FVKAYA+HLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARKIYLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ +I+ELD+KGGRRITSSGQRDLDQVAGRIA Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIA 140
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.325e-56 Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 3 Query: 9 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 425 TA+ VKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT KEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG +RNGSRPPHF KSSG+++R+IL QLQ II++D KGGR ITS G+RDLDQVAGR+ V Sbjct: 5 TARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDV 143
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.778e-43 Identity = 76/135 (56.30%), Postives = 105/135 (77.78%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 +VKDVS HEF +A+AA LK+SGK+++P W D VKTG KEL+PY+PDWY+IRAAS+ R +Y+R G+GSF +IYGG +R G+ P HF K++GS++R +L L+ I+E D GGRR+TS G+RDLD++A +IA Sbjct: 4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQIA 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.936e-42 Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFVKA+AA LK+SGK++LP W D+VKT KELAPYDPDW+Y+RAAS AR +Y+RGG+GVG+ +IYGG KR G++P F S V+R +L L+ ++E D+ GGRR+TS GQRDLD++AG++A Sbjct: 7 VKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVA 140
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.600e-41 Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 431 VKDV+ EFVKA AA K+SGK++ P W D VK G KELAP+D DWYYIR AS+AR +Y+RGG+GVG+ +IYGG +RNG+RP H+S+ S +VAR +L L+ ++E D GGRR+TS GQRD+D++AG++ V++ Sbjct: 6 VKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQVVVLS 142
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.290e-40 Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.290e-40 Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 6.404e-40 Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139 The following BLAST results are available for this feature:
BLAST of CF832149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832149 ID=CF832149; Name=CF832149; organism=Citrus sinensis; type=EST; length=599bpback to top |