CF832337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.303e-83 Identity = 146/198 (73.74%), Postives = 164/198 (82.83%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAG-SEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGD 592 GALLNACRIH ++LGEL+A HIFE D + VGYY+LLCNLYA GKW EVAKVRR+M+E GLT+D GCSWVEVKG+VHAFLS D +HPQ KEIN+VLEGFYEKM VG SE SMD++E S+ EIFCGHSE A+AFGLINT PGMPIWVTKNL C +CH+TVKFISK VRR+I VRD EHFHHFKDG CSCGD Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.728e-55 Identity = 102/200 (51.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 8 LLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 LL++C +H+ LEL E A IF D+ ++G YVL+CN+YA++G+W E+AK+R MR+KGL P CSW+E+K + H F+SGD HP + +IN L+ E+M+ G+ A + V D E K E+ GHSE LAVAFG+INT PG I VTKN+ C CH +KFISKI R+I VRD FHHF G CSCGD YW Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD--YW 715
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.659e-54 Identity = 104/202 (51.49%), Postives = 134/202 (66.34%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSM-DKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL+AC+ HR +ELGE AA +F D + G+YV L NLYAA+ WD VA+VR M+EKGL D GCSWVEV+G + AF GD HP+ +EI +E ++K GF ++ S+ D ++ E C HSE +A+A+GLI+T G P+ +TKNL C +CH K ISK+V R+I VRDT FHHFKDG CSCGD YW Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD--YW 694
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 1.007e-51 Identity = 96/201 (47.76%), Postives = 135/201 (67.16%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMDKSEASKAEI-FCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 +LL A RIH LE+GE+AA ++ + + +YVLL N+Y+++G WD+ +VRR M+E+G+ +PGCSW+E EVH F++GD+ HPQ ++++ LE +E+M+ G+ + E + EI CGHSE LA+AFG++NT+PG I V KNL C CH KFISKIV R+I +RD FH FK+GTCSCGD YW Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGD--YW 890
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.099e-49 Identity = 93/202 (46.04%), Postives = 126/202 (62.38%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGS-EYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALLN+CR+ ++L E+AA +F + + G YVLL N+YAA G W EV +R M GL +PGCSW++VK V+ L+GD HPQI +I ++ ++M+ G + ++ D E + ++ GHSE LAV FGL+NT G P+ V KNL C CH +KFIS R+IF+RDT FHHFKDG CSCGD +W Sbjct: 561 GALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD--FW 760
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.107e-49 Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 +LL ACRIH+ +EL E++ +FE D+ + GYY+LL ++YA +G+W +V +VR +M+ +GL PG S +E+ GEVH FL GD HPQ ++I L K+ G+ + + V D E K HSE LA+AFG++NT PG + V KNL C CHN +K ISKIV R+ VRD + FHHFKDG CSCGD YW Sbjct: 461 SLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGD--YW 659
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.959e-48 Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAG-SEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL CRIH ++L E A +FE + + GYYVL+ N+YA + KW++V ++R+ + ++GL +PGCSW+E+KG V+ F++GD+ +P+ + I + L +M G++ ++Y +D E K E CGHSE LA+A G+I++ G I VTKNL C CH KF+SK+ RR+I +RD+ FH FKDG CSC G+W Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC--RGFW 871
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.152e-47 Identity = 90/201 (44.78%), Postives = 127/201 (63.18%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 ALLNACR+H+ ELG AA H+FE D G +V+L N+YA+ G+W++ A+VR+ M+E G+ +P CSWVE++ +H F++ D HPQ +EI E K+K +G+ + +V + + + HSE +A+AF L+NT PG I + KN+ C CH +K SK+V R+I VRDT FHHFKDG CSC D YW Sbjct: 435 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKD--YW 633
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.566e-47 Identity = 92/202 (45.54%), Postives = 126/202 (62.38%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL+ACR+H ++LG++A+ H+FE + HVGY+VLL N+YA++GKW+ V ++R + KGL PG S +EV +V F +G+ HP +E+ L K+K +G+ +V D + K I HSE LA+AF LI T I + KNL C CH+ KFISKI R+I VRD+ FHHFK+G CSCGD YW Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD--YW 823
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47 Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSM-DKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 G LL A R+H EL E AA IF + + G YVLL NLYA+SG+W +V K+R MR+KG+ PG SW+E++ + H F GD FHP+ EI + LE +MK G+ V + D E K + HSE LAVA+G++ + G PI V KNL C CHN +K++++I R I +RD FHHFKDG+CSCGD YW Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGD--YW 781 The following BLAST results are available for this feature:
BLAST of CF832337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832337 ID=CF832337; Name=CF832337; organism=Citrus sinensis; type=EST; length=714bpback to top |