CF832596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.503e-86 Identity = 157/192 (81.77%), Postives = 179/192 (93.23%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILSSETM IP+GV +K+NAK+IEVEGPRGKL R+FKHLNLDF L+TD E GK++LKIDAWFGSRKTSAAIRTALSHV+NLITGVTKG+RYKMRFVYA FPINASI N +KSIEIRNFLGEKKVR+V++LDGV+++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKG +V E+ Sbjct: 3 TILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3) HSP 1 Score: 314.694 bits (805), Expect = 2.835e-85 Identity = 153/192 (79.69%), Postives = 176/192 (91.67%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILSSETM+IP+ V +K++AK+IEVEGPRGKL R+FKHLNLDF L+ D ETGK++LKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI KSIEIRNFLGEKKVR+VEMLDGVT++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK IV E+ Sbjct: 3 TILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.400e-84 Identity = 153/192 (79.69%), Postives = 175/192 (91.15%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILSSETM+IP+GV +K+NAK+IEVEGPRGKL+R+FKHLNLDF L+ D TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI +KSIEIRNFLGEKKVR+VEMLDGV ++RS+KVKDE+IL+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKG I E+ Sbjct: 3 TILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 310.842 bits (795), Expect = 4.094e-84 Identity = 152/188 (80.85%), Postives = 175/188 (93.09%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 TIL+SETMEIPEGV V++ AK++ VEGPRGKL+RNFKHLNLDF L+ G R+L++DAWFG+R+T AAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFPINASI N++ +IEIRNFLGEKKVR+V+ML+GVT+LRS+KVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS+KGTI Sbjct: 3 TILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGG----RKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56 Identity = 112/192 (58.33%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V++ + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.117e-56 Identity = 113/192 (58.85%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V + + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A IRT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.117e-56 Identity = 110/189 (58.20%), Postives = 137/189 (72.49%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIV 572 TILS++T++IP+ V V + + + V+GPRG L R F H+NL+ L+ + ++L++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+V Sbjct: 3 TILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVV 188
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.117e-56 Identity = 112/192 (58.33%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V + + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.765e-56 Identity = 112/192 (58.33%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V + + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQPD 191
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.765e-56 Identity = 112/192 (58.33%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V + + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191 The following BLAST results are available for this feature:
BLAST of CF832596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832596 ID=CF832596; Name=CF832596; organism=Citrus sinensis; type=EST; length=677bpback to top |