CF832856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 462 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 728 P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A + SA NY Sbjct: 80 PLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 462 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 728 P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A + SA NY Sbjct: 80 PLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 48/128 (37.50%), Postives = 79/128 (61.72%), Query Frame = -3 Query: 345 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDEEYDSML 728 PT IGD V +G +++H T+ E+F+G G+TL DG VVE++G + AGSL+ I SGE WGG+PAKF+R++T ++ + + + NL++ H + +KS E+ + L +K+ + D +L Sbjct: 117 PTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDDESQLEKIIEQNINLSEQHEKQTSKSAKELNND--LLQKYVKNRTRSDHIL 242
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = -3 Query: 447 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQ 728 PT IGD V++GH AV+HGC +ED VGM AT+L+G + + ++ A +LV QN IP + G P + +R+LT+EEI I ++A Y L++ Sbjct: 60 PTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSE 153
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.408e-16 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 432 TTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 725 T I VTVG ++L CT+E E +G + L++G +VE ++ AGS+V RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E Sbjct: 133 TIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 230
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = -3 Query: 432 TTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 725 T I VTVG ++L CT+E E +G + L++G +VE ++ AGS++ RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E Sbjct: 137 TLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 234
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14 Identity = 35/99 (35.35%), Postives = 64/99 (64.65%), Query Frame = -3 Query: 432 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 728 P T+G VTVGH+A+LHGC+V D + VG+ A +L+G + ++ ++ A +L+ + IP G + G+P K +R+L++ + + SA +Y + A+ +A + Sbjct: 70 PLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYARD 168
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -3 Query: 381 TTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA-----QVHAAENAKSFD----EIEFEKVLRKK 725 T +G++ +GHSA+LHGC + A VGM A ++DG V+ + +V A + V+ +P+ + G+PAK +R+L+++E+A+ Q Y L +H E + + + F++ LR K Sbjct: 72 TVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPK 195
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 450 TTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 725 T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR++TD+E+ + + Y +LA Sbjct: 72 TIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKHLNTKEYQDLA 163
BLAST of CF832856 vs. ExPASy Swiss-Prot
Match: CAIE_SALTI (Carnitine operon protein caiE OS=Salmonella typhi GN=caiE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 450 TTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 725 T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR++TD+E+ + + Y +LA Sbjct: 72 TIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELYWKRLNTKEYQDLA 163 The following BLAST results are available for this feature:
BLAST of CF832856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832856 ID=CF832856; Name=CF832856; organism=Citrus sinensis; type=EST; length=736bpback to top |