CF832859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 5.540e-54 Identity = 100/126 (79.37%), Postives = 108/126 (85.71%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPSCG 379 YHV LSIFTS+PD W I +FPI+PIH LDE+P VRG+LSDLTCDSDGKIDKFI G +SLPLHEM GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVT+A+PGPSCG Sbjct: 497 YHVNLSIFTSVPDAWGIEQVFPIIPIHRLDEKPSVRGILSDLTCDSDGKIDKFINGESSLPLHEMEGG-----RTYYLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGPSCG 617
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.782e-52 Identity = 97/125 (77.60%), Postives = 107/125 (85.60%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPSC 376 YHV LS+FTS+PD+W I LFPIVPIH LDE+P RG+LSDLTCDSDGKIDKFIGG +SLPLHEM G G G YYLGMFLGG+YEEALGG+HNLFGGPSVVRVLQSDGPH FAVT+A+ G SC Sbjct: 509 YHVNLSVFTSVPDFWGINQLFPIVPIHRLDEKPTARGILSDLTCDSDGKIDKFIGGESSLPLHEMEGHG----GGYYLGMFLGGSYEEALGGLHNLFGGPSVVRVLQSDGPHGFAVTRAVAGSSC 629
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 3.040e-52 Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPS 373 YHV LS+FTSIPD+W I LFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHEM GC G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPH FAVT+A+ G S Sbjct: 481 YHVNLSVFTSIPDFWGIDQLFPIVPIHKLDQRPAARGILSDLTCDSDGKINKFIGGESSLPLHEMDNNGC-SGGRYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVMGQS 603
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.733e-51 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPS 373 Y++ LS+FTSIPD W I LFPIVPIH LD+RPG RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ G G G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVT+A+PG S Sbjct: 494 YNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLTCDSDGKINKFIGGESSLPLHELDKNGSG--GRYFLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGQS 615
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 3.146e-49 Identity = 93/124 (75.00%), Postives = 105/124 (84.68%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPS 373 Y+V LS+FTSIPD+W I LFPI+PIH LD++P RG+LSDLTCDSDGKIDKFIG +SLPLHE+ GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGP S+AVT+A+PGPS Sbjct: 506 YNVNLSVFTSIPDFWGIGQLFPIMPIHRLDQQPKARGILSDLTCDSDGKIDKFIGDESSLPLHELSGG-----EGYYLGMFLGGAYEEALGGVHNLFGGPSVVRVQQSDGPQSYAVTRAVPGPS 624
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.195e-48 Identity = 89/115 (77.39%), Postives = 101/115 (87.83%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFA 346 YHV LS+FTSIPD+W + LFPIVPIH LDE+P +RG+LSDLTCDSDGK+DKFIGG +SLPLHE+ G G+ G YYLGMFLGGAYEEALGG+HNLFGGPSVVRV+QSD PHSFA Sbjct: 391 YHVNLSVFTSIPDFWGFSQLFPIVPIHRLDEKPTMRGILSDLTCDSDGKVDKFIGGESSLPLHEI---GSGDGGRYYLGMFLGGAYEEALGGLHNLFGGPSVVRVMQSDSPHSFA 502
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.478e-48 Identity = 93/124 (75.00%), Postives = 102/124 (82.26%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPS 373 Y+V LS+F SIPD+W I LFPIVPIH LD+RP RG+LSDLTCDSDGKI+KFIGG +SLPLHE+ G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQ DGPH FAVT+AM G S Sbjct: 487 YNVNLSVFHSIPDFWGIDQLFPIVPIHRLDQRPVARGILSDLTCDSDGKINKFIGGESSLPLHELDNNG------YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQKDGPHGFAVTRAMMGQS 604
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.322e-47 Identity = 92/125 (73.60%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPGPSC 376 YH+ LS+FTS+PD WAI +FPI+PI L ERP V GVLSDLTCDSDGK+D FIGG SLPLHE+ G RG YYLGMFLGGAY+EALGG+HNLFGGPSVVRV QSDGPH FAVT+A GPSC Sbjct: 497 YHINLSVFTSLPDMWAIGQMFPIIPIQRLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHELPVH--GTRG-YYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTRAAAGPSC 618
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPE1_AVESA (Arginine decarboxylase OS=Avena sativa GN=SPE1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.820e-28 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTQAMPG 367 YH+ LS+F+ +PDYW I LFP++P+ LDE+P + L D+TCDSDGK+DKFI ++PLH + + G YY+ + L GAY+EAL HNLFGGPS+VRV+ + +F V A+ G Sbjct: 432 YHMNLSVFSLMPDYWGIQHLFPMMPVSRLDEKPTHKATLVDVTCDSDGKVDKFIRDTETMPLHPL----DPKLGGYYVAVLLTGAYQEALSNKHNLFGGPSLVRVVGTGNGGAFNVEAALLG 549
BLAST of CF832859 vs. ExPASy Swiss-Prot
Match: SPEA_THEEB (Biosynthetic arginine decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=speA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.540e-27 Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 YHVTLSIFTSIPDYWAIA*LFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 316 Y++ LS+F S+PD WAI LFPI+PIH LDE P RG+L+DLTCDSDGKID+FI + E+ GE PYYLG+FL GAY+E +G +HNLFG + V + Sbjct: 462 YYINLSVFQSVPDSWAIDQLFPIMPIHRLDEEPTERGILADLTCDSDGKIDQFIDLRDVKSVLELHPFRPGE--PYYLGLFLNGAYQEIMGNLHNLFGDTNAVHI 564 The following BLAST results are available for this feature:
BLAST of CF832859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832859 ID=CF832859; Name=CF832859; organism=Citrus sinensis; type=EST; length=381bpback to top |