CF832980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.441e-48 Identity = 94/140 (67.14%), Postives = 115/140 (82.14%), Query Frame = -1 Query: 287 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKD-MSTNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQSG 703 ANGREE LNHVEAERQRREKLNQRFYALRAVVPNI KMDKASLL DAITYITD+Q KIRV ETEK M + QI+ E+D+Q RH+DAVVR+SCPL+ HPVS V++T E++++ +SNV+ TE+ V+HTF+++ Q G Sbjct: 312 ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGG 451
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.870e-38 Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = -1 Query: 287 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEK---DMSTNKQKQISV---PEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQSG 703 ANGREEPLNHVEAERQRREKLNQRFYALR+VVPNI KMDKASLLGDAI+YI +LQ K++++E E+ D S ++ I+V PE+D Q +E+ VVRV PLD HP S +++ + E+ +S ED + HTF I++ +G Sbjct: 387 ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSLSESNTITVEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNG 531
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.935e-35 Identity = 73/139 (52.52%), Postives = 101/139 (72.66%), Query Frame = -1 Query: 293 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKD-MSTNKQKQISV-PEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQ 703 ANGR E LNHVEAERQRREKLNQRFYALR+VVPNI KMDKASLLGDA++YI +L K++V+E E++ + + IS+ +I+ Q ED VR++CPL+ HP S + F E ++ SN+ ++D V+HTF ++++ Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSSNPPISLDSDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSE 563
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.322e-27 Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = -1 Query: 299 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKDMSTNKQKQISVP---------------------------EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQ 703 ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN+ KMDKASLLGDAI+YI++L+ K++ E++K+ QKQI V E+D + DA++R+ C +HP + M+ E + +++S D +I +++ Sbjct: 408 ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE---ELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVK 566
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.145e-26 Identity = 70/166 (42.17%), Postives = 95/166 (57.23%), Query Frame = -1 Query: 290 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKD--------------------------MSTNKQKQIS--VPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQS 703 ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN+ KMDKASLLGDAI+YI +L+ K++ E++K+ S+N+ S EID + D ++RV C DHP + M+ E + +++S D +I +++ S Sbjct: 407 ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGS 572
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.151e-26 Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = -1 Query: 299 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKDMSTNKQKQISVP-------------------------EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQ 703 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPN+ KMDKASLLGDAI YI +L+ K+ E+EK N+ +++ + EI+ + DA++RV +HP + +M + ++ +++S D +I +++ Sbjct: 444 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVK 603
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 61/157 (38.85%), Postives = 93/157 (59.24%), Query Frame = -1 Query: 299 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEK---DMSTNKQKQI-----SVPEI-DFQPR-------------HEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQ 703 A+GR++PLNHVEAER RREKLN RFYALRAVVPN+ KMDK SLL DA+ YI +L+ K +E EK ++ N+ K+I ++P + ++ + +DA+VRV D HP + +M + ++ +++S D +I +++ Sbjct: 335 AHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVK 491
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.389e-19 Identity = 57/159 (35.85%), Postives = 78/159 (49.06%), Query Frame = -1 Query: 287 LNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLE--------TEKDMSTNKQKQISVPEIDFQPRH-------------------EDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQSG 682 L+HVEAE+QRREKLN RFYALRA+VP + +MDKASLL DA++YI L+ KI LE TE D N S +++Q E+A++RV +HP S++M E Q +N S ++ + G Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEG 406
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: TT8_ARATH (Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 371 EPLNHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLET----EKDMSTNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSE 688 E L+HV AER+RREKLN++F LR++VP + KMDK S+LGD I Y+ L+ ++ LE ++ T K+ + E++ D ++ + C D + +++ E Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHE 469
BLAST of CF832980 vs. ExPASy Swiss-Prot
Match: BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = -1 Query: 341 NHVEAERQRREKLNQRFYALRAVVPNIFKMDKASLLGDAITYITDLQMKIRVLETEKD----------------MSTNKQ----------KQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNV 679 +H+ AER+RREKL QRF AL A+VP + KMDKAS+LGDA+ +I LQ ++ LE +K + N Q + +PEI+ + ED ++++ C ++ +M + I+ S+V Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290 The following BLAST results are available for this feature:
BLAST of CF832980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832980 ID=CF832980; Name=CF832980; organism=Citrus sinensis; type=EST; length=757bpback to top |