CF833101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.826e-75 Identity = 137/193 (70.98%), Postives = 157/193 (81.35%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLNTAAQM 582 VN +E IVGW+STG GV GGS+LIH+FY REVPNP+HLTVDTGF NGEGT+KA+VS NLSLGDRQL A FQEIP+DLRM++AERVGFD+LK+TSVDKLP+DLEGME+ MERLLTLIND+YKYVD V G PDN++GR +++ VASLPKL P FD LVN ITRTQLSLAEKLNTAAQM Sbjct: 100 VNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQM 292
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30 Identity = 67/192 (34.90%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 V+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 167 VSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30 Identity = 67/192 (34.90%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 V+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 167 VSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30 Identity = 67/192 (34.90%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 V+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 163 VSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 354
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.769e-30 Identity = 67/192 (34.90%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 V+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDTG ++G ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 167 VSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27 Identity = 71/197 (36.04%), Postives = 104/197 (52.79%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 VNP E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T V P+ DL + ++L L++ I KYVDD + PDN+VGR L + + S+P ++ F ++ N + +TQL L EKL Sbjct: 79 VNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASQKLQQLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 VN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ DL + +L +L++ I KYVDD + PDN+VGR L + + S+P +S F ++ N + +TQL L EKL Sbjct: 79 VNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLNEKL 274
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 VN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ DL + +L +L++ I KYVDD + PDN+VGR L + + S+P +S F ++ N + +TQL L EKL Sbjct: 79 VNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLNEKL 274
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 70/196 (35.71%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST---SVDKLPS------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 VN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T S + P DL + ++L +L++ I KYVDD + PDN+VGR L + + S+P ++ F ++ N + +TQL L EKL Sbjct: 79 VNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPMLDLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274
BLAST of CF833101 vs. ExPASy Swiss-Prot
Match: EI3F1_DROYA (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila yakuba GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 4 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 564 VN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T V P+ DL + +L +L++ I KYVDD + PDN+VGR L + + S+P ++ F ++ N + +TQL L EKL Sbjct: 79 VNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274 The following BLAST results are available for this feature:
BLAST of CF833101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833101 ID=CF833101; Name=CF833101; organism=Citrus sinensis; type=EST; length=696bpback to top |