CF833459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FI+L FIL+SIW + YY+FGF L Y HLC ED+ W W++F SG A+Y +Y+I+Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 531 FGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FI+L FIL+SIW + YY+FGF L Y HLC ED+ W W++F SG A+Y +Y+I+Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 532 FGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FI+L FIL+SIW + YY+FGF L Y HLC ED+ W W++F SG A+Y +Y+++Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 532 FGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FI+L FIL+SIW + YY+FGF L Y HLC ED+ W W++F SG A+Y +Y+++Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 532 FGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FI S+IW +FYY+FGF + Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 512 FGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FI S+IW +FYY+FGF + Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 511 FGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FI S+IW +FYY+FGF + Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 512 FGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FI S+IW +FYY+FGF + Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 511 FGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FI S+IW +FYY+FGF + Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 511 FGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833459 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24 Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = -3 Query: 309 FGTLFIELCFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 707 FG +FIEL FIL+S+W +FYY+FGF + Y LC ED WWW++F +GS +LY+F+YS+++ F ++ +S+LL YS IM++A TGTIGF + ++ V ++SS+ I+ Sbjct: 511 FGAVFIELHFILTSLWDNQFYYIFGFLFIVLMILIVTSAEISIVMCYFQLCAEDHHWWWRSFLTAGSSSLYMFIYSVSF--FRYLGITKFISSLLDFSYSFIMSLAFAALTGTIGFYSCYFLVRKIYSSIHIN 641 The following BLAST results are available for this feature:
BLAST of CF833459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833459 ID=CF833459; Name=CF833459; organism=Citrus sinensis; type=EST; length=709bpback to top |