CF833982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U497A_ARATH (UPF0497 membrane protein At2g36330 OS=Arabidopsis thaliana GN=At2g36330 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.466e-58 Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = -2 Query: 270 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHDS 752 IL+RS+ E + F+ LGFRL EVVL+LISFS+MAADKT+GWSGDSFDRY+EYR+CLSVNV+AFVYS FQA DLAY+L K KH+I +HLR F+F +DQ TRVDDW SNWGKDEFTEMASAS+AMSFLAF+AFA SS+ISGYNLFN S Sbjct: 122 ILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLSVNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDDWVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNLFNQGS 282
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U49D7_ARATH (UPF0497 membrane protein At5g62820 OS=Arabidopsis thaliana GN=At5g62820 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.154e-46 Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = -2 Query: 270 LKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHDS 749 + R++ + + LGFR+ EV+L +ISFS+MAADKTQGWSGDS+DRY+EYRYCL+VNVIAFVYS F+A D A Y+AK ++I F F MDQ ATRVDDW SNWGKDEFT+MA+AS+A+SFLAF AFA+S++IS Y LF H S Sbjct: 137 VNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSGDSYDRYKEYRYCLAVNVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSASSCAATRVDDWVSNWGKDEFTQMATASIAVSFLAFGAFAVSALISSYRLFTHAS 296
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U49A7_ARATH (UPF0497 membrane protein At5g40300 OS=Arabidopsis thaliana GN=At5g40300 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.471e-34 Identity = 72/154 (46.75%), Postives = 101/154 (65.58%), Query Frame = -2 Query: 285 KRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNL 746 + SK+ + + A LGFR+I V L+SFSVM +D+ +GW+ DSF Y+E+R+CL+ NVI FVYSGF DL Y L+ R++LR +F +DQ + RVDDWQSNWG D+F ++A ASVA+S+++F+AFA S+ SGY L Sbjct: 111 RESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASASTSASIRVDDWQSNWGADKFPDLARASVALSYVSFVAFAFCSLASGYAL 264
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U497R_ORYSJ (UPF0497 membrane protein Os02g0134500 OS=Oryza sativa subsp. japonica GN=Os02g0134500 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.517e-27 Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = -2 Query: 273 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHD 752 IL R + A L L R+ +L L + +V+AAD +G++ DS+ Y + RY +VNVI FVYS Q + LA + + KH+ FDFFMDQ RV DW NWG D F +MA++S+A+SF+AF+ FA+S++IS YNLF D Sbjct: 148 ILLRKRPTAVLQRTALVARVAAALLCLAALAVLAADSRKGFALDSYSNYSQLRYSEAVNVIGFVYSVLQFFVLADLMRRNKHLNPRRKGDYFDFFMDQVLAYLLISSSSSATARVGDWIDNWGSDPFPKMANSSIAISFMAFLVFAISALISAYNLFRRD 307
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U497F_MAIZE (UPF0497 membrane protein 15 OS=Zea mays PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.511e-27 Identity = 64/160 (40.00%), Postives = 89/160 (55.62%), Query Frame = -2 Query: 273 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHD 752 IL R + A + A L R L L + +V+A+D +GW+ DS+ Y ++RY +VNV+ F+YS FQ LA + + KH+I + R FDF MDQ R D NWG D F MA+ S+A+SF+AF+ FA+ S+IS YNLF D Sbjct: 142 ILSRKRRAAVMQRAALLARAAAAGLCLAALAVLASDTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNKHLIPHPKRDLFDFTMDQVVAYLLISSSSSATARASDLIENWGSDSFPSMANGSIAISFVAFVVFAICSLISAYNLFRRD 301
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U4975_SORBI (UPF0497 membrane protein Sb04g002820 OS=Sorghum bicolor GN=Sb04g002820 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.112e-26 Identity = 66/160 (41.25%), Postives = 87/160 (54.37%), Query Frame = -2 Query: 273 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHD 752 IL R + A + L R L L + +V+AAD +GW+ DS+ Y ++RY +VNVI F+YS FQ L + + KH+I + R FDF MDQ RV D NWG D F MA+ S+A+SFLAF FA+ S+IS YNLF D Sbjct: 292 ILSRKRRAAAMQRTALLARGAAAGLCLAALAVLAADTRKGWARDSYSNYTQFRYSEAVNVIGFIYSVFQFVALVELMRRNKHLIPHPKRDLFDFTMDQVLTYLLISSSSSATARVSDLIDNWGSDPFPSMANGSIAISFLAFAVFAICSLISAYNLFRRD 451
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U497G_MAIZE (UPF0497 membrane protein 16 OS=Zea mays PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.205e-26 Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = -2 Query: 273 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFNHD 752 IL R + A + A L R L + +V+AAD +GW+ DS+ Y ++RY +VNV+ F+YS FQ LA + + H+I + R FDF MDQ R D NWG D F MA+ S+A+SF+AF+ FA+ S+IS YNLF D Sbjct: 146 ILSRKRRAAVMQRAALLARAAAAGXXLAALTVLAADTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNTHLIPHPKRGLFDFTMDQVLAYLLISSSSSATARASDLTENWGSDSFPNMANGSIAISFVAFVVFAICSLISAYNLFRRD 305
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U497H_MAIZE (UPF0497 membrane protein 17 OS=Zea mays PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.532e-19 Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = -2 Query: 279 LGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFN 707 L RL VLSL +FSV+A+ +T GW+GD + R+ +YRY ++VNVI F YS Q+ +L + R F+DQ A+R D W S +G D F + ++ +SF+AF+ AL++VIS NLF+ Sbjct: 225 LALRLATAVLSLAAFSVIASARTSGWAGDYYARHLQYRYAVAVNVIVFAYSVAQSLGKIRHLVSPRFTFRTMSSYYCSLFLDQVLAYLLMSASSAAASRNDLWVSRFGTDAFVRKITGALWLSFVAFLVLALNAVISXANLFS 367
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: U4974_SORBI (UPF0497 membrane protein Sb03g029220 OS=Sorghum bicolor GN=Sb03g029220 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 279 RLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNWGKDEFTEMASASVAMSFLAFIAFALSSVISGYNLFN 698 RL VLSL +FSV+A+ +T GW+GD + + +YRY ++VNVI YS Q++ L + + R F+DQ A+R D W S +G D F ++++ +SF+AF+ AL+++IS NLF+ Sbjct: 320 RLATAVLSLAAFSVIASARTSGWAGDYYAHHLQYRYAVAVNVIVCAYSIAQSFGEIRRLISPRFIFRSMSSYYCSLFLDQALAYLLMSASSAAASRNDLWVSRFGTDAFNRKITSALWLSFIAFLMLALNALISTANLFS 459
BLAST of CF833982 vs. ExPASy Swiss-Prot
Match: N24_MEDTR (UPF0497 membrane protein N24 OS=Medicago truncatula GN=N24 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.034e-16 Identity = 62/171 (36.26%), Postives = 82/171 (47.95%), Query Frame = -2 Query: 294 RSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQ--------GWSGDSFD----------RYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQXXXXXXXXXXXXXATRVDDWQSNW---GKDEFTEMASASVAMSFLAFIAFALSSVISG 743 +SK E + A L R+ V LI+FSV+ A + + W F ++ E+RY + NVI FVYSG Q L YL KH I L+ F+ +DQ AT + W G D F EMA+ASV+MSFLAF AFAL+S++SG Sbjct: 57 KSKKEVKWYVALLVIRVFAFVFCLIAFSVLGASEQRVLVSENLTNWYSSGFTIQTPYEFHWYKWDEFRYSFAANVIGFVYSGLQICHLVMYLITKKHTINPKLQGYFNVAIDQTLAYILMSASSSAATAAHLLKDYWLEHGADTFIEMANASVSMSFLAFGAFALASLVSG 227 The following BLAST results are available for this feature:
BLAST of CF833982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833982 ID=CF833982; Name=CF833982; organism=Citrus sinensis; type=EST; length=828bpback to top |