CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2617 contig Csv1_Contig2617:78..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.677e-93
Identity = 160/260 (61.54%), Postives = 207/260 (79.62%), Query Frame = 1
Query:    7 SSLLVPCVQELAKNPALV-VPDRYIRPDQDSPLISDDTLIS-QIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFE--NGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            SS+LVP VQE+ K   +  VP RY+R DQD   + DD  +  +IP+IDM+ L S  +MDSE+ KLDF CKEWGFFQLVNHG+ ++FL+K+K E++ FFNL MEEKKK+WQRP ++EGFGQAFVVSE+QKLDWADLF     PV LRKPHLFPKLP   R+TLE+YS E++++A+ LI+KM   L IK EE+ + F+  + +Q MRMNYYPPCPQP++V+GL+PHSD+  LT+L+Q+N+VEGLQ+KKDGKW+PV PLP+AF
Sbjct:   10 SSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAF 269          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.732e-53
Identity = 114/259 (44.02%), Postives = 155/259 (59.85%), Query Frame = 1
Query:    4 GSSLLVPCVQELAKNPALVVPDRYIRPD--QDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            G SL V  VQ LA      +P+RY+RP+   D  +  D++L  +IPVID+  L  ++    ELAK    C +WGFFQL+NHG+    +EK+K + E FF L  +EK  Y Q P  MEG+GQAFV SEEQKLDWAD+  ++T PV  R    +P  P S RET+E YSMEL+ +A  L   M + L ++ E + +     +        P      + +GLSPHSDA  LT+L+Q+NEV GL +KKD KW+P+ P+  AF
Sbjct:    9 GGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT-VFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAF 264          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.024e-36
Identity = 86/261 (32.95%), Postives = 141/261 (54.02%), Query Frame = 1
Query:   28 VQELAKNPALVVPDRYIRPDQDSPLISDDTLIS------QIPVIDMQSLHSEESMDSE--LAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            V+ LAK+  + +P  YIRP ++   I+D  L        Q+P ID++++ S++    E  + +L     +WG   L+NHG+    +E++KK  E FF+LS+EEK+KY   Q  G ++G+G     +   +L+W D F  +  P   R   ++PK P    E    Y+  L+ LA  +   +   L ++ + + +     E  L  M++NYYP CPQPE  +G+  H+D +ALT +L  N V GLQ+  +GKW+    +PD+
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDS 266          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32
Identity = 84/269 (31.23%), Postives = 138/269 (51.30%), Query Frame = 1
Query:   16 LVPCVQELAKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESM------DSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            + P V+ L+ +    +P  YIRP ++   I +           Q+P ID++ + SE+ +      +    +L     EWG   LVNHG+S   + ++K   E FFNL MEEK+KY   Q  G + G+G     +   +L+W D F  +  P   R   ++PK P         YS++L++LA  ++S +   L +++  + +     E  L   ++NYYP CPQPE  +G+  H+D +ALT +L  N V GLQ+  +GKW+    +P++
Sbjct:    5 VAPRVESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNS 272          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31
Identity = 77/253 (30.43%), Postives = 135/253 (53.36%), Query Frame = 1
Query:   28 VQELAKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAF 774
            +  LAK   L +   ++R + + P ++ +   ++IP+I +  L  + +    E+  K+   C++WG FQ+V+HG+ +  + ++ +    FF L  EEK +Y    G   GF  + V+  +  +DW +  +  + P++ R    +PK P   R T EVYS +L  L   L+  + E + ++  ++ +   +  Q + +NYYP CPQP+  +G+  H+D   +TILLQ + V GLQ  +DG   WI V P+  AF
Sbjct:    6 ITALAKEKTLNLD--FVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAF 255          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31
Identity = 80/260 (30.77%), Postives = 136/260 (52.31%), Query Frame = 1
Query:   28 VQELAKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREF---FENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            V+ LAK+    +P  Y+RP ++   I +           Q+P ID++ + SE+    E   +L     EWG   LVNHG+S   + ++K   E FF+  +EEK+KY   Q  G+++G+G     S   +L+W D F     P   R   ++PK P         Y+ +++ LA  +++ +   L +++  + +     E+ L  M++NYYP CPQPE  +G+  H+D +ALT +L  N V GLQ+  +G+W+    +P++
Sbjct:   12 VESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGQWVTAKCVPNS 270          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31
Identity = 81/261 (31.03%), Postives = 137/261 (52.49%), Query Frame = 1
Query:   28 VQELAKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREF---FENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            V+ LA +    +P  YIRP  +   I D      +    Q+P ID++ + S+ E + ++   KL     +WG   LVNHG+S   ++K++K  + FF+L +E+K+KY   Q  G ++G+G     +   +L+W D F     P   R   ++P+ P    E    Y+ +L+ LA  ++  +   L + +  + +     E  L  M++NYYP CPQPE  +G+  H+D +ALT +L  N V GLQ+  +GKW+    +P++
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNS 270          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31
Identity = 85/259 (32.82%), Postives = 137/259 (52.90%), Query Frame = 1
Query:   28 VQELAKNPALV--VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQG------MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            VQE+A    ++  +P  YIR + + P+IS    ++ ++PVID+    S+      +  +    KEWG FQ+VNHG+    + KL++  + FF L  EEK+   +  G   +EG+G       + K  W D       P        +PK PP+ RE  E Y+  L+ + +NL   +   L+++       F++G  G      M++NYYPPCP+P+  +G++ H+D +A+T+L+  NEV GLQV KDG W     +P+A
Sbjct:    6 VQEIASLSKVIDTIPAEYIRSENEQPVISTVHGVVLEVPVIDL----SDSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNS----FKDGAGGDDLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVP-NEVPGLQVYKDGHWYDCKYIPNA 254          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 82/243 (33.74%), Postives = 129/243 (53.09%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFF-NLSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            +P  YIR + + P  +    ++ Q+PVID++    E  M   +A      KEWG FQL+NHG+    +  L+K  + FF ++  EEK+   + PG  D+EG+G +     E K  W D       P        +PK PPS RE  E Y   ++ + + +   +   L ++  EM E    +  +  +++NYYPPCP+P+  +G+  H+D + +TIL+  NEV+GLQV KDG W  V  +P+A
Sbjct:   31 IPSEYIRSENEQPAATTLHGVVLQVPVIDLRD-PDENKMVKLIADAS---KEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNA 268          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 77/264 (29.17%), Postives = 135/264 (51.14%), Query Frame = 1
Query:   22 PCVQELAKNPALVVPDRYIRPDQDSPLISDDTLIS-------QIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            P V+ELA++    +P  Y+RP+++   I  + L         Q+P ID++ + S  EE       +L     +WG   L+NHG+    ++++K   + FF L +EEK+ Y   Q  G+++G+G     +   +L+W D F     P H     ++P  PP        Y+ +L+ LA  ++S +   L ++   + +     E+ +  M++N+YP CPQPE  +G   H+D +ALT +L  N V GLQ+  + KW+    +P++
Sbjct:   10 PRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILH-NMVPGLQLFYEDKWVTAKCVPNS 272          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
SRG1_ARATH4.677e-9361.54Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA4.732e-5344.02S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH4.024e-3632.95Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_VITVI2.699e-3231.23Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FNSI_PETCR1.026e-3130.43Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_PETHY2.984e-3130.77Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MALDO2.984e-3131.03Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_EUSGR2.984e-3132.82Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETHY8.683e-3133.74Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
LDOX_PERFR1.934e-3029.17Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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