CF834421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 3.803e-107 Identity = 180/228 (78.95%), Postives = 206/228 (90.35%), Query Frame = -2 Query: 153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAV 836 NCLFRMGGAAILL SKY+L+ TVRTHKGADDKC+ C+ Q ED ++GV+LSK+LMAVAG+ALKTNITTLGP+VLP SEQLLFFATLV +K+FKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL+L+EWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR++KGDR WQIAFGSGFKCNS+VW+A+R++NP KEKNPW++EIHEFPV VP+V+ + Sbjct: 282 NCLFRMGGAAILLSNKRWDRRRSKYELVDTVRTHKGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGRKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKEKNPWMDEIHEFPVEVPKVSTI 509
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 384.8 bits (987), Expect = 3.219e-106 Identity = 189/235 (80.43%), Postives = 211/235 (89.79%), Query Frame = -2 Query: 153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQRED--DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMK-IKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK----NPWIEEIHEFPVHVPRVAAV 836 NC+FRMGGAA+LL SKYQLIHTVRTHKG+DD +NCV+QRED D K++GVSLSK+LMA+AGEALKTNITTLGP+VLPMSEQLLFFATLVA+KVF +K IKPYIPDFKLAFEHFCIHAGGRAVLDE+EKNL+LSEWHMEPSRMTL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSGFKCNSAVW+ALRTI+P+KEK NPWI+EIHEFPV VPR + V Sbjct: 287 NCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEKKKKTNPWIDEIHEFPVPVPRTSPV 521
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 5.140e-104 Identity = 185/234 (79.06%), Postives = 208/234 (88.89%), Query Frame = -2 Query: 153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQRED----DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMK-IKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK-NPWIEEIHEFPVHVPRVAAV 836 NC+FRMGGAA+LL SKYQLIHTVRTHKGADD + CV+QRED +T ++GVSLSK+LMA+AGEALKTNITTLGP+VLPMSEQLLFFATLVA+KVFK+K IKPYIPDFKLAFEHFCIHAGGRAVLDE+EKNL+LSEWHMEPSRMTL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSGFKCNSAVW+ALRTI+P EK NPWI+EI +FPV VPR+ + Sbjct: 293 NCIFRMGGAAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQVPRITPI 526
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.112e-90 Identity = 157/220 (71.36%), Postives = 187/220 (85.00%), Query Frame = -2 Query: 177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836 NCLFR+GG+A+LL SKY+L+H VRTH+GADDK + CV+Q +DDT R GVSLSKDLMA+AGE LKTNITTLGP+VLP+SEQ+LFF TLV KK+F K+KPYIPDFKLAFEHFCIHAGGRAV+DELEKNL+LS H+E SRMTL+RFGNTSSSS+WYELAY EAKGRMR+G+R WQIAFGSGFKCNSA+W+ALR + P+ +PW + I ++PV Sbjct: 294 NCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILFFMTLVVKKLFNGKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPS-NNSPWEDCIDKYPV 512
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 7.205e-90 Identity = 154/223 (69.06%), Postives = 190/223 (85.20%), Query Frame = -2 Query: 171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAK-EKNPWIEEIHEFPVHV 836 NC+FRMGGAAILL SKY L++ VRTHKG+DDK YNCV+Q+ED+ +GVSL+++LM+VAG+ALKTNITTLGP+VLP+SEQL+F +LV +K+FK+K+KPYIPDFKLAFEHFCIHAGGRAVLDE++KNL+L +WHMEPSRMTL+RFGNTSSSSLWYE+AY+EAKGR++ GDR WQIAFGSGFKCNSAVW+ALR ++ + N W I ++PV V Sbjct: 304 NCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKV 526
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 7.966e-89 Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = -2 Query: 177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836 NCLFR+GG+AILL SKY+L+HTVRTHKGA +K +NCV+Q +DD + GVSLSKDLMA+AGEALK NITTLGP+VLP+SEQ+LFF TLV KK+F K+KPYIPDFKLAF+HFCIHAGGRAV+DELEKNL+LS+ H+E SRMTL+RFGNTSSSS+WYELAY EAKGRM+KG+R WQIAFGSGFKCNSAVW AL + P+ +PW I +PV Sbjct: 290 NCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVYQEQDDNGKTGVSLSKDLMAIAGEALKANITTLGPLVLPISEQILFFMTLVTKKLFNSKLKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWVALNNVKPS-VSSPWEHCIDRYPV 508
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 6.744e-88 Identity = 155/223 (69.51%), Postives = 187/223 (83.86%), Query Frame = -2 Query: 171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFK-MKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHV 836 NCLFR+GG+A+LL SKY+L+HTVRTHKG+D+ +NCV+Q +D+ + GVSLSKDLMA+AGEALKTNIT+LGP+VLP+SEQ+LFFAT VAK++F K KPYIPDFKLA +HFCIHAGGRAV+DELEK+L+LS H+E SRMTL+RFGNTSSSS+WYELAY+EAKGRMRKG+R WQIAFGSGFKCNSAVW ALR + P+ NPW IH +PV + Sbjct: 264 NCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVYQEQDECLKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQILFFATFVAKRLFNDKKKKPYIPDFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPS-VNNPWEHCIHRYPVKI 485
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.344e-85 Identity = 150/225 (66.67%), Postives = 180/225 (80.00%), Query Frame = -2 Query: 162 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRV 836 NCLFRMG AAI + +KY+L H VRTH+GADDK + CV+++ED VG++LSKDLMA+AGEALK NITT+GP+VLP SEQLLF +L+ +K+F K KPYIPDFKLAFEHFCIHAGGRAV+DEL+KNL+LS H+E SRMTL+RFGNTSSSSLWYEL+Y E+KGRMR+GDR WQIAFGSGFKCNSAVW+ RTI K+ PW + I +PV +P V Sbjct: 271 NCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRGADDKSFYCVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLFLTSLIGRKIFNPKWKPYIPDFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKD-GPWSDCIDRYPVFIPEV 494
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.652e-84 Identity = 149/225 (66.22%), Postives = 178/225 (79.11%), Query Frame = -2 Query: 162 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRV 836 NCLFRMGGAAILL +KY+L H VRTH+GADDK YNCV ++ED VG++LSKDLM +AGEALK NITT+GP+VLP SEQLLF ++L+ +K+F K KPYIPDFK AFEHFCIHAGGRAV+DEL+KNL+LS H+E SRMTL+RFGNTSSSSLWYEL+Y EA+GRM++ DR WQIAFGSGFKCNSAVW+ RTI + W + I +PV +P V Sbjct: 266 NCLFRMGGAAILLSNRRSDRWRAKYKLCHLVRTHRGADDKSYNCVMEQEDKNGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQLLFLSSLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNRTIKTPTD-GAWSDCIERYPVFIPEV 489
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.681e-81 Identity = 144/225 (64.00%), Postives = 178/225 (79.11%), Query Frame = -2 Query: 171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK---NPWIEEIHEFPVHV 836 NCLFR+GGAA++L SKY+L H VRTHKG+ DK Y C Q+ED VGV+LSK+L VAG++LKTN+T LGP+VLP+SE+L F LV K+F++K+ PY+PDFKL F+HFCIHAGGRA+LD +EK L LSE+ +EPSRMTL+RFGNTSSSSLWYELAY EAK R+++GDR WQ+AFGSGFKCNS VW+ALRTI PA E NPW + +H++PVHV Sbjct: 242 NCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDSLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTI-PANESLVGNPWGDSVHKYPVHV 465 The following BLAST results are available for this feature:
BLAST of CF834421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834421 ID=CF834421; Name=CF834421; organism=Citrus sinensis; type=EST; length=837bpback to top |