CF834423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.258e-46 Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 YE+ +VD YIPIPQRQT+LPFLLAVE VFSITGRGTVATGRVERGT+KVG+TVDLVGL+ETR++TVTGVEMFQK L EA+AGDNVGLLL G+Q ADI RGMVLA PG+ITP T Sbjct: 267 YELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKPGSITPHT 380
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU1_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.258e-46 Identity = 94/114 (82.46%), Postives = 100/114 (87.72%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 +++ VD YIPIPQRQTDLPFLLAVE VFSITGRGTVATGRVERGTIKVG+TVDLVGL+ETRN TVTGVEMFQK L EA+AGDNVGLLL GVQ DI RGMVLA PGTITP T Sbjct: 270 FQLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHT 383
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.337e-44 Identity = 89/114 (78.07%), Postives = 100/114 (87.72%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y++ +VD YIPIPQRQT+LPFL+A+E VFSITGRGTVATGRVERGT+KVG+ VD+VGLK+TRN TVTGVEMFQK L EAMAGDNVGLLL G+Q DI RGMVLA PGTITP T Sbjct: 276 YQLMDNVDEYIPIPQRQTELPFLMAIEDVFSITGRGTVATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHT 389
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.746e-44 Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 YE+ +VD YIPIPQRQT+LPFLLA+E VF+ITGRGTVATGRVERGTI+VG+TVD+VG+K+TRN TVTGVEMFQK L EA+AGDNVGLLL G+Q DI RGMVLA PGTITP T Sbjct: 270 YELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHT 383
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.930e-43 Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 YE+ +VD YIPIP RQT+LPFL+A+E VFSITGRGTVATGRVERGT+++G TVD+VGLK+TR+ TVTGVEMFQK L EAMAGDNVGLLL G+Q DI RGMVLA PGTITP T Sbjct: 269 YELMDAVDSYIPIPVRQTELPFLMAIEDVFSITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHT 382
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.930e-43 Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 YE+ +VD YIPIP RQT+LPFL+A+E VFSITGRGTVATGRVERGT+++G TVD+VGLK+TR+ TVTGVEMFQK L EAMAGDNVGLLL G+Q DI RGMVLA PGTITP T Sbjct: 269 YELMDAVDSYIPIPVRQTELPFLMAIEDVFSITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHT 382
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PEA (Elongation factor Tu, chloroplastic OS=Pisum sativum GN=tufA PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.251e-42 Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y++ VD+YIPIPQRQT+LPFLLA+E VFSIT RGTVATGR+ERG +KVG VDLVGL+ETRN TVTGVEMFQK L +AMAGDNVGLLL G+Q DI RGMVLA PGTITP + Sbjct: 279 YQLMDEVDKYIPIPQRQTELPFLLAIEDVFSITXRGTVATGRIERGLVKVGDVVDLVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHS 392
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.295e-39 Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 +++ +VD YIP P+R T+ PFL+AVE VFSITGRGTVATGRVERG++KVG+T+++VGL+ETR TVTG+EMFQKTL E++AGDNVG+LL G+Q DI RGMVLA PG+ITP T Sbjct: 200 FKLMDTVDAYIPTPERDTEKPFLMAVEDVFSITGRGTVATGRVERGSVKVGETIEIVGLRETRTTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKIDIQRGMVLAKPGSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.295e-39 Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y++ VD YIP P+R+TD FL+AVE VFSITGRGTVATGR+ERG +KVG T+++VGL+ETRN T+TG+EMFQK+L EA+AGDNVG+L+ G+Q DI RGMVLA PG+ITP T Sbjct: 199 YQLMDKVDEYIPTPERETDKAFLMAVEDVFSITGRGTVATGRIERGKVKVGDTIEIVGLRETRNTTITGLEMFQKSLDEALAGDNVGILVRGIQKTDIERGMVLAAPGSITPHT 312
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.691e-39 Identity = 81/114 (71.05%), Postives = 94/114 (82.46%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y++ VD YIP P+R D PFL+AVE VFSITGRGTVATGR+ERG + VG+TV+LVG+++TR+ TVTGVEMFQKTL E MAGDNVGLLL GVQ DI RGMVLA PG+ITP T Sbjct: 200 YKLMEEVDAYIPTPERDVDKPFLMAVEDVFSITGRGTVATGRIERGKVVVGETVELVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGVQKEDIERGMVLAKPGSITPHT 313 The following BLAST results are available for this feature:
BLAST of CF834423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834423 ID=CF834423; Name=CF834423; organism=Citrus sinensis; type=EST; length=345bpback to top |